Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313291.1 |
| length | 763 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC117599574 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 19271595 ~ 19272694 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K03707 | tenA; thiaminase (transcriptional activator TenA) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU337468 | lncRNA | downstream | 333500 | 18868057 ~ 18938095 (-) | False | G284885 |
| TU337467 | lncRNA | downstream | 333500 | 18934868 ~ 18938095 (-) | True | G284885 |
| TU337489 | lncRNA | downstream | 348698 | 18918456 ~ 18922897 (-) | False | LOC117599567 |
| XR_004579967.1 | lncRNA | downstream | 348725 | 18918396 ~ 18922870 (-) | True | LOC117599567 |
| TU337464 | lncRNA | downstream | 409443 | 18861845 ~ 18862152 (-) | True | G284882 |
| TU337873 | lncRNA | upstream | 15897 | 19288591 ~ 19290806 (-) | True | G285245 |
| TU337891 | lncRNA | upstream | 83866 | 19356560 ~ 19357907 (-) | False | LOC113532309 |
| XR_003403326.2 | lncRNA | upstream | 84280 | 19356974 ~ 19385863 (-) | True | LOC113532309 |
| XR_003403325.2 | lncRNA | upstream | 96633 | 19369327 ~ 19385863 (-) | False | LOC113532309 |
| TU337928 | lncRNA | upstream | 132385 | 19405079 ~ 19405317 (-) | True | G285287 |
| XM_034313076.1 | mRNA | downstream | 9551 | 19260713 ~ 19262044 (-) | True | LOC117599464 |
| XM_034313075.1 | mRNA | downstream | 17398 | 19252823 ~ 19254197 (-) | True | LOC117599463 |
| XM_026923684.2 | mRNA | downstream | 24232 | 19190496 ~ 19247363 (-) | True | cdk17 |
| XM_026923685.2 | mRNA | downstream | 40508 | 19190496 ~ 19231087 (-) | False | cdk17 |
| XM_026923199.2 | mRNA | downstream | 110314 | 19140445 ~ 19161281 (-) | True | lta4h |
| XM_026922764.2 | mRNA | upstream | 10456 | 19283150 ~ 19284499 (-) | True | LOC113531838 |
| XM_026923849.2 | mRNA | upstream | 41919 | 19314613 ~ 19335240 (-) | False | mcm10 |
| XM_026923848.2 | mRNA | upstream | 41919 | 19314613 ~ 19335238 (-) | True | mcm10 |
| XM_026923246.2 | mRNA | upstream | 62967 | 19335661 ~ 19355138 (-) | False | pparaa |
| XM_034313316.1 | mRNA | upstream | 62967 | 19335661 ~ 19354998 (-) | False | pparaa |
| trnae-cuc_38 | other | downstream | 1059202 | 18212322 ~ 18212393 (-) | True | trnae-cuc_38 |
| XR_003403330.2 | other | downstream | 1083597 | 18156824 ~ 18187998 (-) | True | cald1a |
| trnaa-ugc_14 | other | downstream | 1179051 | 18092473 ~ 18092544 (-) | False | trnaa-ugc_14 |
| trnaa-ugc_13 | other | downstream | 1180973 | 18090551 ~ 18090622 (-) | True | trnaa-ugc_13 |
| trnaa-ugc_11 | other | downstream | 1187741 | 18083783 ~ 18083854 (-) | True | trnaa-ugc_11 |
| TU338301 | other | upstream | 1040373 | 20313067 ~ 20320050 (-) | True | G285607 |
| trnaa-ugc_16 | other | upstream | 1149707 | 20422401 ~ 20422472 (-) | True | trnaa-ugc_16 |
| XR_004579970.1 | other | upstream | 2188132 | 21460826 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579971.1 | other | upstream | 2188132 | 21460826 ~ 21471056 (-) | True | LOC113544587 |
| XR_003404518.2 | other | upstream | 2188133 | 21460827 ~ 21471100 (-) | False | LOC113544587 |
