Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403333.2 |
| length | 892 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC113532334 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 15209348 ~ 15213255 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU335044 | lncRNA | downstream | 103353 | 14812922 ~ 15105995 (-) | True | G282718 |
| TU334999 | lncRNA | downstream | 469911 | 14739216 ~ 14739437 (-) | True | G282673 |
| TU334974 | lncRNA | downstream | 478344 | 14715045 ~ 14731004 (-) | False | G282649 |
| TU334971 | lncRNA | downstream | 478344 | 14721809 ~ 14731004 (-) | True | G282649 |
| TU334700 | lncRNA | downstream | 818791 | 14389823 ~ 14390557 (-) | True | G282410 |
| TU335298 | lncRNA | upstream | 57739 | 15270994 ~ 15271200 (-) | True | G282950 |
| TU335356 | lncRNA | upstream | 137451 | 15350706 ~ 15353441 (-) | True | G282999 |
| TU335389 | lncRNA | upstream | 174693 | 15387948 ~ 15390101 (-) | True | G283022 |
| TU335461 | lncRNA | upstream | 303969 | 15517224 ~ 15521690 (-) | True | G283081 |
| TU335610 | lncRNA | upstream | 541062 | 15754317 ~ 15754605 (-) | True | G283218 |
| XM_034313143.1 | mRNA | downstream | 25273 | 15139925 ~ 15184075 (-) | True | LOC113531972 |
| XM_026923156.2 | mRNA | downstream | 70871 | 15122734 ~ 15138477 (-) | False | LOC113532053 |
| XM_026923158.2 | mRNA | downstream | 74024 | 15122734 ~ 15135324 (-) | True | LOC113532053 |
| XM_026923159.2 | mRNA | downstream | 76353 | 15122734 ~ 15132995 (-) | False | LOC113532053 |
| XM_026923155.2 | mRNA | downstream | 76353 | 15122734 ~ 15132995 (-) | False | LOC113532053 |
| XM_026923534.2 | mRNA | upstream | 681 | 15213936 ~ 15236310 (-) | True | LOC113532243 |
| XM_034313258.1 | mRNA | upstream | 23287 | 15236542 ~ 15263393 (-) | False | LOC113532267 |
| XM_026923565.2 | mRNA | upstream | 23287 | 15236542 ~ 15263393 (-) | True | LOC113532267 |
| XM_034313283.1 | mRNA | upstream | 112118 | 15325373 ~ 15336933 (-) | False | LOC113532250 |
| XM_034313284.1 | mRNA | upstream | 112118 | 15325373 ~ 15333836 (-) | False | LOC113532250 |
| TU335292 | other | downstream | 31735 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 2628285 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 3549021 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 3621324 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 3949956 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU336422 | other | upstream | 1745269 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 1890310 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 2765530 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 2765530 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 2857492 | 18070747 ~ 18082361 (-) | False | tmem209 |
