Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403338.2 |
| length | 893 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC113532391 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 13146282 ~ 13147358 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007050 | cell cycle arrest | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU333645 | lncRNA | downstream | 668653 | 12476264 ~ 12477629 (-) | True | G281527 |
| TU333624 | lncRNA | downstream | 687190 | 12457563 ~ 12459092 (-) | True | G281510 |
| TU333597 | lncRNA | downstream | 777017 | 12368959 ~ 12369265 (-) | True | G281486 |
| TU333565 | lncRNA | downstream | 892127 | 12251314 ~ 12254155 (-) | True | G281455 |
| TU333459 | lncRNA | downstream | 1052223 | 12093857 ~ 12094059 (-) | True | G281373 |
| TU334183 | lncRNA | upstream | 21317 | 13168675 ~ 13210493 (-) | True | G281964 |
| TU334201 | lncRNA | upstream | 111794 | 13259152 ~ 13285718 (-) | True | G281981 |
| TU334236 | lncRNA | upstream | 172815 | 13320173 ~ 13373048 (-) | False | G282006 |
| TU334237 | lncRNA | upstream | 172815 | 13320173 ~ 13321414 (-) | True | G282006 |
| TU334285 | lncRNA | upstream | 260255 | 13407613 ~ 13409326 (-) | True | G282047 |
| XM_026922677.2 | mRNA | downstream | 36068 | 12962716 ~ 13110214 (-) | True | LOC113531778 |
| XM_034313323.1 | mRNA | downstream | 326576 | 12809321 ~ 12819706 (-) | True | prl2 |
| XM_034313228.1 | mRNA | downstream | 342860 | 12787882 ~ 12803422 (-) | True | nuak1a |
| XM_034313229.1 | mRNA | downstream | 343230 | 12787882 ~ 12803052 (-) | False | nuak1a |
| XM_034313230.1 | mRNA | downstream | 347626 | 12787882 ~ 12798656 (-) | False | nuak1a |
| XM_026922632.2 | mRNA | upstream | 41504 | 13188862 ~ 13198925 (-) | True | tnni1d |
| XM_034313190.1 | mRNA | upstream | 129568 | 13276926 ~ 13304279 (-) | False | scyl2 |
| XM_026923049.2 | mRNA | upstream | 129568 | 13276926 ~ 13302507 (-) | True | scyl2 |
| XM_026923050.2 | mRNA | upstream | 129568 | 13276926 ~ 13302505 (-) | False | scyl2 |
| XM_026923473.2 | mRNA | upstream | 157096 | 13304454 ~ 13310263 (-) | True | depdc4 |
| XR_003403346.2 | other | downstream | 565219 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 1485955 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 1558258 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 1886890 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 2139139 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU335292 | other | upstream | 2026990 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 3811166 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 3956207 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 4831427 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 4831427 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
