Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579873.1 |
| length | 278 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | LOC117599455 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 8698430 ~ 8698791 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU330836 | lncRNA | downstream | 86088 | 8612118 ~ 8612342 (-) | True | G279064 |
| TU330707 | lncRNA | downstream | 307871 | 8389498 ~ 8390559 (-) | True | G278963 |
| TU330657 | lncRNA | downstream | 458754 | 8238974 ~ 8239676 (-) | True | G278920 |
| TU330636 | lncRNA | downstream | 481137 | 8217013 ~ 8217293 (-) | True | G278911 |
| TU330235 | lncRNA | downstream | 731009 | 7966819 ~ 7967421 (-) | False | avpr1ab |
| TU331172 | lncRNA | upstream | 494825 | 9193616 ~ 9194003 (-) | True | G279382 |
| TU331392 | lncRNA | upstream | 637545 | 9336336 ~ 9337530 (-) | True | G279588 |
| TU331405 | lncRNA | upstream | 687342 | 9386133 ~ 9387789 (-) | False | G279592 |
| TU331406 | lncRNA | upstream | 687342 | 9386133 ~ 9389747 (-) | True | G279592 |
| TU331436 | lncRNA | upstream | 785302 | 9484093 ~ 9484948 (-) | True | G279620 |
| XM_034313254.1 | mRNA | downstream | 64475 | 8626921 ~ 8633955 (-) | True | hsp90b1 |
| XM_034313061.1 | mRNA | downstream | 149802 | 8488152 ~ 8548628 (-) | False | sbf1 |
| XM_026922697.2 | mRNA | upstream | 468798 | 9167589 ~ 9188935 (-) | True | tspan12 |
| XM_034313077.1 | mRNA | upstream | 468798 | 9167589 ~ 9188122 (-) | False | tspan12 |
| XM_026922951.2 | mRNA | upstream | 590304 | 9289095 ~ 9291409 (-) | True | parietopsin |
| XM_026923675.2 | mRNA | upstream | 639977 | 9338768 ~ 9347046 (-) | True | LOC113532331 |
| XM_026923676.2 | mRNA | upstream | 639977 | 9338768 ~ 9347043 (-) | False | LOC113532331 |
| TU330637 | other | downstream | 478750 | 8218561 ~ 8219680 (-) | True | G278912 |
| TU330291 | other | downstream | 630353 | 8053088 ~ 8068077 (-) | True | G278634 |
| trnal-aag_11 | other | downstream | 1104622 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| trnam-cau_46 | other | downstream | 2595283 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| XR_003403345.2 | other | downstream | 2665237 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| XR_003403340.2 | other | upstream | 110429 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU331209 | other | upstream | 508560 | 9207351 ~ 9208563 (-) | True | G279415 |
| trnay-gua_2 | other | upstream | 923742 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU332243 | other | upstream | 1570966 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| XR_004579975.1 | other | upstream | 2296314 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
