Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579901.1 |
| length | 172 |
| RNA type | ncRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC117599488 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 2543147 ~ 2543631 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579927.1 | lncRNA | downstream | 83035 | 2459061 ~ 2460112 (-) | True | LOC117599514 |
| XR_004579931.1 | lncRNA | downstream | 84306 | 2457641 ~ 2458841 (-) | True | LOC117599518 |
| TU326537 | lncRNA | downstream | 106080 | 2436635 ~ 2437067 (-) | True | G275520 |
| XR_004579885.1 | lncRNA | downstream | 133043 | 2409036 ~ 2410104 (-) | False | LOC117599475 |
| TU326553 | lncRNA | upstream | 88795 | 2632426 ~ 2709379 (-) | True | G275536 |
| TU326881 | lncRNA | upstream | 291069 | 2834700 ~ 2845904 (-) | True | G275815 |
| TU326970 | lncRNA | upstream | 436206 | 2979837 ~ 2981862 (-) | True | G275891 |
| TU327113 | lncRNA | upstream | 674088 | 3217719 ~ 3221204 (-) | True | G276021 |
| TU327114 | lncRNA | upstream | 674558 | 3218189 ~ 3219050 (-) | True | G276022 |
| XM_034312976.1 | mRNA | downstream | 127954 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034312975.1 | mRNA | downstream | 169843 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312972.1 | mRNA | downstream | 1117496 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312971.1 | mRNA | downstream | 1147203 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312970.1 | mRNA | downstream | 1166828 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312978.1 | mRNA | upstream | 85034 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034312980.1 | mRNA | upstream | 120766 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XM_034312981.1 | mRNA | upstream | 124724 | 2668355 ~ 2669336 (-) | True | LOC117599440 |
| XM_034312982.1 | mRNA | upstream | 128390 | 2672021 ~ 2678032 (-) | True | LOC117599441 |
| XM_034313335.1 | mRNA | upstream | 661657 | 3205288 ~ 3246996 (-) | True | pawr |
| XR_004579903.1 | other | downstream | 36053 | 2506587 ~ 2507094 (-) | True | LOC117599490 |
| XR_004579918.1 | other | downstream | 88066 | 2454252 ~ 2455081 (-) | True | LOC117599505 |
| XR_004579944.1 | other | downstream | 114206 | 2428508 ~ 2428941 (-) | True | LOC117599531 |
| XR_004579940.1 | other | downstream | 161813 | 2379889 ~ 2381334 (-) | True | LOC117599527 |
| XR_004579921.1 | other | downstream | 314202 | 2228117 ~ 2228945 (-) | True | LOC117599508 |
| TU327069 | other | upstream | 598903 | 3142534 ~ 3201297 (-) | True | G275981 |
| TU327062 | other | upstream | 742206 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| XR_004579995.1 | other | upstream | 886559 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327175 | other | upstream | 993366 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004580002.1 | other | upstream | 1021404 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
