Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579913.1 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 3 |
| gene id | LOC117599500 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1714892 ~ 1715739 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579912.1 | lncRNA | downstream | 22718 | 1691307 ~ 1692174 (-) | True | LOC117599499 |
| XR_004579936.1 | lncRNA | downstream | 82570 | 1631739 ~ 1632322 (-) | True | LOC117599523 |
| XR_004579937.1 | lncRNA | downstream | 85311 | 1629023 ~ 1629581 (-) | True | LOC117599524 |
| TU326444 | lncRNA | downstream | 87837 | 1587770 ~ 1627055 (-) | True | LOC117599486 |
| XR_004579938.1 | lncRNA | downstream | 120928 | 1593154 ~ 1593964 (-) | True | LOC117599525 |
| XR_004579891.1 | lncRNA | upstream | 111077 | 1826816 ~ 1832783 (-) | True | LOC117599478 |
| XR_004579933.1 | lncRNA | upstream | 117707 | 1833446 ~ 1833855 (-) | True | LOC117599520 |
| TU326465 | lncRNA | upstream | 145758 | 1861497 ~ 1906414 (-) | True | G275457 |
| TU326474 | lncRNA | upstream | 209288 | 1925027 ~ 2079405 (-) | True | G275465 |
| XR_004579930.1 | lncRNA | upstream | 215191 | 1930930 ~ 1932174 (-) | True | LOC117599517 |
| XM_034312972.1 | mRNA | downstream | 289241 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312971.1 | mRNA | downstream | 318948 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312970.1 | mRNA | downstream | 338573 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312968.1 | mRNA | downstream | 416993 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XM_034312967.1 | mRNA | downstream | 459706 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312975.1 | mRNA | upstream | 655885 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 696803 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034313123.1 | mRNA | upstream | 766644 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312978.1 | mRNA | upstream | 912926 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034312980.1 | mRNA | upstream | 948658 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XR_004579917.1 | other | downstream | 27213 | 1687208 ~ 1687679 (-) | True | LOC117599504 |
| XR_004579899.1 | other | downstream | 87629 | 1626779 ~ 1627263 (-) | False | LOC117599486 |
| XR_004579898.1 | other | downstream | 125094 | 1589313 ~ 1589798 (-) | True | LOC117599485 |
| TU326424 | other | downstream | 137376 | 1465859 ~ 1577516 (-) | True | G275420 |
| XR_004579919.1 | other | upstream | 210594 | 1926333 ~ 1927161 (-) | True | LOC117599506 |
| XR_004580035.1 | other | upstream | 301320 | 2017059 ~ 2017165 (-) | True | LOC117599628 |
| TU326484 | other | upstream | 322496 | 2038235 ~ 2040062 (-) | True | G275475 |
| XR_004579900.1 | other | upstream | 337959 | 2053698 ~ 2054182 (-) | True | LOC117599487 |
| TU326491 | other | upstream | 345748 | 2061487 ~ 2062120 (-) | True | G275480 |
