Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579921.1 |
| length | 147 |
| RNA type | ncRNA |
| GC content | 0.50 |
| exon number | 3 |
| gene id | LOC117599508 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 2228117 ~ 2228945 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326501 | lncRNA | downstream | 111646 | 2115209 ~ 2116471 (-) | True | G275488 |
| XR_004579941.1 | lncRNA | downstream | 120911 | 2106397 ~ 2107206 (-) | True | LOC117599528 |
| TU326474 | lncRNA | downstream | 148712 | 1925027 ~ 2079405 (-) | True | G275465 |
| TU326492 | lncRNA | downstream | 158988 | 2065674 ~ 2069129 (-) | False | G275481 |
| XR_004579932.1 | lncRNA | downstream | 168187 | 2058728 ~ 2059930 (-) | True | LOC117599519 |
| TU326513 | lncRNA | upstream | 2493 | 2231438 ~ 2232746 (-) | True | G275500 |
| TU326514 | lncRNA | upstream | 7087 | 2236032 ~ 2237113 (-) | True | G275501 |
| TU326518 | lncRNA | upstream | 43057 | 2272002 ~ 2272500 (-) | True | G275504 |
| TU326473 | lncRNA | upstream | 148560 | 2377505 ~ 2409045 (-) | True | LOC117599475 |
| XR_004579922.1 | lncRNA | upstream | 152397 | 2381342 ~ 2383458 (-) | True | LOC117599509 |
| XM_034312972.1 | mRNA | downstream | 802466 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312971.1 | mRNA | downstream | 832173 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312970.1 | mRNA | downstream | 851798 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312968.1 | mRNA | downstream | 930218 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XM_034312967.1 | mRNA | downstream | 972931 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312975.1 | mRNA | upstream | 142679 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 183597 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034313123.1 | mRNA | upstream | 253438 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312978.1 | mRNA | upstream | 399720 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034312980.1 | mRNA | upstream | 435452 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| TU326496 | other | downstream | 116169 | 2089064 ~ 2111948 (-) | True | G275484 |
| TU326497 | other | downstream | 116169 | 2089064 ~ 2111948 (-) | False | G275484 |
| XR_004579920.1 | other | downstream | 147340 | 2079950 ~ 2080777 (-) | True | LOC117599507 |
| TU326493 | other | downstream | 158988 | 2067657 ~ 2069129 (-) | True | G275481 |
| TU326491 | other | downstream | 165997 | 2061487 ~ 2062120 (-) | True | G275480 |
| XR_004579940.1 | other | upstream | 150944 | 2379889 ~ 2381334 (-) | True | LOC117599527 |
| XR_004579944.1 | other | upstream | 199563 | 2428508 ~ 2428941 (-) | True | LOC117599531 |
| XR_004579918.1 | other | upstream | 225307 | 2454252 ~ 2455081 (-) | True | LOC117599505 |
| XR_004579903.1 | other | upstream | 277642 | 2506587 ~ 2507094 (-) | True | LOC117599490 |
| XR_004579901.1 | other | upstream | 314202 | 2543147 ~ 2543631 (-) | True | LOC117599488 |
