Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579934.1 |
| length | 208 |
| lncRNA type | read_through |
| GC content | 0.53 |
| exon number | 3 |
| gene id | LOC117599521 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 532826 ~ 533618 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579905.1 | lncRNA | downstream | 2086 | 530099 ~ 530740 (-) | True | LOC117599492 |
| TU326075 | lncRNA | downstream | 14784 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326076 | lncRNA | downstream | 14784 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326078 | lncRNA | downstream | 14784 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326079 | lncRNA | downstream | 14784 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326100 | lncRNA | upstream | 169713 | 703331 ~ 704000 (-) | True | G275167 |
| TU326102 | lncRNA | upstream | 169713 | 703331 ~ 704306 (-) | False | G275167 |
| TU326103 | lncRNA | upstream | 170152 | 703770 ~ 705100 (-) | True | G275168 |
| TU326104 | lncRNA | upstream | 174713 | 708331 ~ 718266 (-) | True | G275169 |
| TU326105 | lncRNA | upstream | 184827 | 718445 ~ 719883 (-) | True | G275170 |
| XM_034313120.1 | mRNA | downstream | 7801 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313121.1 | mRNA | downstream | 7801 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313118.1 | mRNA | downstream | 7801 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313117.1 | mRNA | downstream | 7801 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313119.1 | mRNA | downstream | 7801 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313106.1 | mRNA | upstream | 27089 | 560707 ~ 629004 (-) | True | LOC117599466 |
| XM_034313108.1 | mRNA | upstream | 130107 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313110.1 | mRNA | upstream | 130107 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313107.1 | mRNA | upstream | 130107 | 663725 ~ 683075 (-) | True | LOC117595727 |
| XM_034313113.1 | mRNA | upstream | 152418 | 686036 ~ 694483 (-) | True | LOC113543469 |
| TU325948 | other | downstream | 163792 | 365089 ~ 369034 (-) | False | LOC113531599 |
| TU325907 | other | downstream | 279009 | 251625 ~ 253817 (-) | False | LOC117599453 |
| TU325852 | other | downstream | 386786 | 144583 ~ 146040 (-) | True | G274979 |
| TU326084 | other | upstream | 2828 | 536446 ~ 539298 (-) | True | G275152 |
| XR_004579942.1 | other | upstream | 49580 | 583198 ~ 586818 (-) | True | LOC117599529 |
| XR_004579946.1 | other | upstream | 63796 | 597414 ~ 601029 (-) | True | LOC117599533 |
| TU326089 | other | upstream | 75385 | 609003 ~ 611951 (-) | False | LOC117599466 |
| XR_004579923.1 | other | upstream | 95446 | 629064 ~ 631387 (-) | True | LOC117599510 |
