Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579942.1 |
| length | 138 |
| RNA type | ncRNA |
| GC content | 0.40 |
| exon number | 3 |
| gene id | LOC117599529 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 583198 ~ 586818 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579934.1 | lncRNA | downstream | 49580 | 532826 ~ 533618 (-) | True | LOC117599521 |
| XR_004579905.1 | lncRNA | downstream | 52458 | 530099 ~ 530740 (-) | True | LOC117599492 |
| TU326075 | lncRNA | downstream | 65156 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326076 | lncRNA | downstream | 65156 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326078 | lncRNA | downstream | 65156 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326100 | lncRNA | upstream | 116513 | 703331 ~ 704000 (-) | True | G275167 |
| TU326102 | lncRNA | upstream | 116513 | 703331 ~ 704306 (-) | False | G275167 |
| TU326103 | lncRNA | upstream | 116952 | 703770 ~ 705100 (-) | True | G275168 |
| TU326104 | lncRNA | upstream | 121513 | 708331 ~ 718266 (-) | True | G275169 |
| TU326105 | lncRNA | upstream | 131627 | 718445 ~ 719883 (-) | True | G275170 |
| XM_034313115.1 | mRNA | downstream | 13187 | 481574 ~ 570011 (-) | True | LOC117599469 |
| XM_034313101.1 | mRNA | downstream | 25511 | 403961 ~ 557687 (-) | False | LOC113531866 |
| XM_034313120.1 | mRNA | downstream | 58173 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313121.1 | mRNA | downstream | 58173 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313118.1 | mRNA | downstream | 58173 | 516562 ~ 525025 (-) | False | LOC113532194 |
| XM_034313108.1 | mRNA | upstream | 76907 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313110.1 | mRNA | upstream | 76907 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313107.1 | mRNA | upstream | 76907 | 663725 ~ 683075 (-) | True | LOC117595727 |
| XM_034313113.1 | mRNA | upstream | 99218 | 686036 ~ 694483 (-) | True | LOC113543469 |
| XM_034313112.1 | mRNA | upstream | 99218 | 686036 ~ 694483 (-) | False | LOC113543469 |
| TU326084 | other | downstream | 43900 | 536446 ~ 539298 (-) | True | G275152 |
| TU325948 | other | downstream | 214164 | 365089 ~ 369034 (-) | False | LOC113531599 |
| TU325907 | other | downstream | 329381 | 251625 ~ 253817 (-) | False | LOC117599453 |
| TU325852 | other | downstream | 437158 | 144583 ~ 146040 (-) | True | G274979 |
| XR_004579946.1 | other | upstream | 10596 | 597414 ~ 601029 (-) | True | LOC117599533 |
| TU326089 | other | upstream | 22185 | 609003 ~ 611951 (-) | False | LOC117599466 |
| XR_004579923.1 | other | upstream | 42246 | 629064 ~ 631387 (-) | True | LOC117599510 |
| XR_004579897.1 | other | upstream | 283172 | 869990 ~ 870475 (-) | True | LOC117599484 |
| XR_004579907.1 | other | upstream | 545270 | 1132088 ~ 1132569 (-) | True | LOC117599494 |
