Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004580002.1 |
| length | 124 |
| RNA type | ncRNA |
| GC content | 0.55 |
| exon number | 3 |
| gene id | LOC117599595 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 3565035 ~ 3571926 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327145 | lncRNA | downstream | 149895 | 3414868 ~ 3415140 (-) | True | G276049 |
| TU327132 | lncRNA | downstream | 192017 | 3372624 ~ 3373018 (-) | True | G276038 |
| TU327127 | lncRNA | downstream | 192703 | 3299257 ~ 3372332 (-) | False | rps16 |
| TU327261 | lncRNA | upstream | 68041 | 3639967 ~ 3640783 (-) | True | G276153 |
| TU327577 | lncRNA | upstream | 187285 | 3759211 ~ 3829402 (-) | False | golgb1 |
| TU327559 | lncRNA | upstream | 230467 | 3802393 ~ 3815365 (-) | True | G276342 |
| TU327583 | lncRNA | upstream | 240614 | 3812540 ~ 3813351 (-) | True | G276353 |
| TU327616 | lncRNA | upstream | 329336 | 3901262 ~ 3904931 (-) | False | G276384 |
| XM_034313336.1 | mRNA | downstream | 71019 | 3430190 ~ 3494016 (-) | False | lin7a |
| XM_034313337.1 | mRNA | downstream | 71022 | 3430190 ~ 3494013 (-) | False | lin7a |
| XM_034312986.1 | mRNA | downstream | 180112 | 3369680 ~ 3384923 (-) | True | rps16 |
| XM_034312985.1 | mRNA | downstream | 230018 | 3259018 ~ 3335017 (-) | True | ppp1r12a |
| XM_034313335.1 | mRNA | downstream | 318039 | 3205288 ~ 3246996 (-) | True | pawr |
| XM_026909954.2 | mRNA | upstream | 166958 | 3738884 ~ 3755857 (-) | False | hcls1 |
| XM_026909953.2 | mRNA | upstream | 166958 | 3738884 ~ 3755856 (-) | True | hcls1 |
| XM_034313225.1 | mRNA | upstream | 188190 | 3760116 ~ 3782783 (-) | True | golgb1 |
| XM_034312987.1 | mRNA | upstream | 226415 | 3798341 ~ 3811616 (-) | True | orc5 |
| XM_034313181.1 | mRNA | upstream | 285589 | 3857515 ~ 3906653 (-) | True | kmt2e |
| TU327175 | other | downstream | 26292 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004579995.1 | other | downstream | 71019 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327062 | other | downstream | 271245 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| TU327069 | other | downstream | 363738 | 3142534 ~ 3201297 (-) | True | G275981 |
| XR_004579901.1 | other | downstream | 1021404 | 2543147 ~ 2543631 (-) | True | LOC117599488 |
| TU327549 | other | upstream | 164204 | 3736130 ~ 3737077 (-) | True | G276340 |
| TU327682 | other | upstream | 510352 | 4082278 ~ 4091863 (-) | True | G276421 |
| TU327840 | other | upstream | 725934 | 4297860 ~ 4300524 (-) | True | G276530 |
| LOC117599555 | other | upstream | 785613 | 4357539 ~ 4457121 (-) | True | LOC117599555 |
| LOC117599551 | other | upstream | 789406 | 4361332 ~ 4361942 (-) | True | LOC117599551 |
