Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnae-cuc_38 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.63 |
| exon number | 1 |
| gene id | trnae-cuc_38 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 18212322 ~ 18212393 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU337106 | lncRNA | downstream | 27330 | 18180379 ~ 18184992 (-) | True | G284559 |
| TU337057 | lncRNA | downstream | 119783 | 18092217 ~ 18092539 (-) | True | trnaa-ugc_14 |
| TU337055 | lncRNA | downstream | 123380 | 18088654 ~ 18088942 (-) | True | G284520 |
| TU337033 | lncRNA | downstream | 182407 | 18027734 ~ 18029915 (-) | False | ahcyl2b |
| TU336874 | lncRNA | downstream | 311055 | 17901025 ~ 17901267 (-) | True | G284352 |
| TU337140 | lncRNA | upstream | 134060 | 18346453 ~ 18346836 (-) | True | G284590 |
| TU337354 | lncRNA | upstream | 486528 | 18698921 ~ 18747804 (-) | False | LOC113532190 |
| TU337444 | lncRNA | upstream | 607549 | 18819942 ~ 18823200 (-) | True | G284862 |
| TU337448 | lncRNA | upstream | 618532 | 18830925 ~ 18831139 (-) | True | G284866 |
| TU337464 | lncRNA | upstream | 649452 | 18861845 ~ 18862152 (-) | True | G284882 |
| XM_026923661.2 | mRNA | downstream | 618 | 18156824 ~ 18211704 (-) | False | cald1a |
| XM_026923664.2 | mRNA | downstream | 24324 | 18156824 ~ 18187998 (-) | False | cald1a |
| XM_026923662.2 | mRNA | downstream | 24324 | 18156824 ~ 18187998 (-) | False | cald1a |
| XM_026923660.2 | mRNA | downstream | 24324 | 18156824 ~ 18187998 (-) | False | cald1a |
| XM_026923376.2 | mRNA | downstream | 55762 | 18145977 ~ 18156560 (-) | False | tnnt2e |
| XM_026923734.2 | mRNA | upstream | 13107 | 18225500 ~ 18233739 (-) | False | tnni4a |
| XM_026923733.2 | mRNA | upstream | 13107 | 18225500 ~ 18233739 (-) | True | tnni4a |
| XM_026922920.2 | mRNA | upstream | 272047 | 18484440 ~ 18593405 (-) | False | dock4b |
| XM_026922918.2 | mRNA | upstream | 272047 | 18484440 ~ 18593405 (-) | True | dock4b |
| XM_026922919.2 | mRNA | upstream | 274630 | 18487023 ~ 18593405 (-) | False | dock4b |
| XR_003403330.2 | other | downstream | 24324 | 18156824 ~ 18187998 (-) | True | cald1a |
| trnaa-ugc_14 | other | downstream | 119778 | 18092473 ~ 18092544 (-) | False | trnaa-ugc_14 |
| trnaa-ugc_13 | other | downstream | 121700 | 18090551 ~ 18090622 (-) | True | trnaa-ugc_13 |
| trnaa-ugc_11 | other | downstream | 128468 | 18083783 ~ 18083854 (-) | True | trnaa-ugc_11 |
| trnaa-ugc_10 | other | downstream | 129013 | 18083238 ~ 18083309 (-) | True | trnaa-ugc_10 |
| TU338301 | other | upstream | 2100674 | 20313067 ~ 20320050 (-) | True | G285607 |
| trnaa-ugc_16 | other | upstream | 2210008 | 20422401 ~ 20422472 (-) | True | trnaa-ugc_16 |
| XR_004579970.1 | other | upstream | 3248433 | 21460826 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579971.1 | other | upstream | 3248433 | 21460826 ~ 21471056 (-) | True | LOC113544587 |
| XR_003404518.2 | other | upstream | 3248434 | 21460827 ~ 21471100 (-) | False | LOC113544587 |
