Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnam-cau_46 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.60 |
| exon number | 1 |
| gene id | trnam-cau_46 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 6103076 ~ 6103147 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU329033 | lncRNA | downstream | 105684 | 5960674 ~ 5997392 (-) | True | G277567 |
| TU329051 | lncRNA | downstream | 114732 | 5978950 ~ 5988344 (-) | True | G277577 |
| TU328960 | lncRNA | downstream | 321905 | 5778002 ~ 5781171 (-) | True | G277500 |
| TU328962 | lncRNA | downstream | 336809 | 5761660 ~ 5766267 (-) | True | G277502 |
| TU328979 | lncRNA | downstream | 372007 | 5730845 ~ 5731069 (-) | True | G277519 |
| TU329374 | lncRNA | upstream | 680512 | 6783659 ~ 6787471 (-) | True | G277878 |
| TU329377 | lncRNA | upstream | 688115 | 6791262 ~ 6791475 (-) | True | G277881 |
| TU329813 | lncRNA | upstream | 774605 | 6877752 ~ 6878941 (-) | True | G278225 |
| TU329864 | lncRNA | upstream | 968599 | 7071746 ~ 7074585 (-) | True | G278265 |
| TU329874 | lncRNA | upstream | 1125858 | 7229005 ~ 7229440 (-) | True | G278275 |
| XM_034313201.1 | mRNA | downstream | 3484 | 6013024 ~ 6099592 (-) | False | col7a1l |
| XM_026923550.2 | mRNA | downstream | 91533 | 6010290 ~ 6011543 (-) | False | ucn3l |
| XM_026923551.2 | mRNA | downstream | 91533 | 6010290 ~ 6011543 (-) | True | ucn3l |
| XM_026922873.2 | mRNA | downstream | 97947 | 5989192 ~ 6005129 (-) | True | copg2 |
| XM_026922794.2 | mRNA | downstream | 312087 | 5784910 ~ 5790989 (-) | True | si:dkeyp-38g8.5 |
| XM_034313150.1 | mRNA | upstream | 30412 | 6133559 ~ 6163886 (-) | False | lrguk |
| XM_034313149.1 | mRNA | upstream | 30412 | 6133559 ~ 6160408 (-) | True | lrguk |
| XM_034313151.1 | mRNA | upstream | 34802 | 6137949 ~ 6160408 (-) | False | lrguk |
| XM_034313148.1 | mRNA | upstream | 63389 | 6166536 ~ 6316303 (-) | True | exoc4 |
| XM_026923160.2 | mRNA | upstream | 156941 | 6260088 ~ 6316303 (-) | False | exoc4 |
| XR_003403345.2 | other | downstream | 69883 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| TU329048 | other | downstream | 111142 | 5981138 ~ 5991934 (-) | False | copg2 |
| TU329042 | other | downstream | 118512 | 5982292 ~ 5984564 (-) | True | G277575 |
| XR_004579951.1 | other | downstream | 1118761 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | downstream | 1130831 | 4970314 ~ 4972245 (-) | False | tmpoa |
| trnal-aag_11 | other | upstream | 1490580 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| TU330291 | other | upstream | 1949941 | 8053088 ~ 8068077 (-) | True | G278634 |
| TU330637 | other | upstream | 2115414 | 8218561 ~ 8219680 (-) | True | G278912 |
| XR_003403340.2 | other | upstream | 2706073 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU331209 | other | upstream | 3104204 | 9207351 ~ 9208563 (-) | True | G279415 |
