Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU88466 |
| length | 358 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC117596929 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32661892 ~ 32665420 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88464 | lncRNA | downstream | 4937 | 32659532 ~ 32659961 (-) | True | G74647 |
| TU88463 | lncRNA | downstream | 12657 | 32651787 ~ 32652241 (-) | True | G74646 |
| XR_004577912.1 | lncRNA | downstream | 16800 | 32647281 ~ 32648098 (-) | True | LOC117596962 |
| TU88457 | lncRNA | downstream | 36902 | 32627561 ~ 32627996 (-) | True | G74640 |
| XR_004577913.1 | lncRNA | downstream | 462044 | 32202081 ~ 32202854 (-) | True | LOC117596963 |
| XR_004577920.1 | lncRNA | upstream | 102168 | 32767588 ~ 32769282 (-) | True | LOC117596968 |
| XR_004577919.1 | lncRNA | upstream | 184507 | 32849927 ~ 32851375 (-) | True | LOC117596967 |
| TU88526 | lncRNA | upstream | 196787 | 32862207 ~ 32862659 (-) | True | G74702 |
| XR_004577918.1 | lncRNA | upstream | 206326 | 32871746 ~ 32873023 (-) | True | LOC117596966 |
| XR_004578073.1 | lncRNA | upstream | 280714 | 32946134 ~ 32947158 (-) | True | LOC117597171 |
| XM_026935889.2 | mRNA | downstream | 937346 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 1120264 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 1131640 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_034304039.1 | mRNA | downstream | 1195257 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
| XM_034303863.1 | mRNA | upstream | 158138 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
| XM_034303864.1 | mRNA | upstream | 307365 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
| XM_026912180.2 | mRNA | upstream | 465667 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 465667 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 465667 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| TU88467 | other | downstream | 2422 | 32661983 ~ 32662476 (-) | False | LOC117596929 |
| LOC117596929 | other | downstream | 2431 | 32661892 ~ 32662467 (-) | True | LOC117596929 |
| LOC117597135 | other | downstream | 5976 | 32658361 ~ 32658922 (-) | True | LOC117597135 |
| TU88461 | other | downstream | 20364 | 32644024 ~ 32644534 (-) | True | G74644 |
| LOC117596950 | other | downstream | 31187 | 32633213 ~ 32633711 (-) | True | LOC117596950 |
| LOC117596927 | other | upstream | 111546 | 32776966 ~ 32777798 (-) | True | LOC117596927 |
| LOC117596938 | other | upstream | 138134 | 32803554 ~ 32804222 (-) | True | LOC117596938 |
| LOC117596923 | other | upstream | 144176 | 32809596 ~ 32810296 (-) | True | LOC117596923 |
| LOC117597139 | other | upstream | 145012 | 32810432 ~ 32811735 (-) | True | LOC117597139 |
| LOC113540133 | other | upstream | 150009 | 32815429 ~ 32816281 (-) | True | LOC113540133 |
