Item | Value |
---|---|
RNA id | TU88467 |
length | 346 |
RNA type | TUCP |
GC content | 0.44 |
exon number | 2 |
gene id | LOC117596929 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 32661892 ~ 32665420 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU88464 | lncRNA | downstream | 2022 | 32659532 ~ 32659961 (-) | True | G74647 |
TU88463 | lncRNA | downstream | 9742 | 32651787 ~ 32652241 (-) | True | G74646 |
XR_004577912.1 | lncRNA | downstream | 13885 | 32647281 ~ 32648098 (-) | True | LOC117596962 |
TU88457 | lncRNA | downstream | 33987 | 32627561 ~ 32627996 (-) | True | G74640 |
XR_004577913.1 | lncRNA | downstream | 459129 | 32202081 ~ 32202854 (-) | True | LOC117596963 |
XR_004577920.1 | lncRNA | upstream | 105112 | 32767588 ~ 32769282 (-) | True | LOC117596968 |
XR_004577919.1 | lncRNA | upstream | 187451 | 32849927 ~ 32851375 (-) | True | LOC117596967 |
TU88526 | lncRNA | upstream | 199731 | 32862207 ~ 32862659 (-) | True | G74702 |
XR_004577918.1 | lncRNA | upstream | 209270 | 32871746 ~ 32873023 (-) | True | LOC117596966 |
XR_004578073.1 | lncRNA | upstream | 283658 | 32946134 ~ 32947158 (-) | True | LOC117597171 |
XM_026935889.2 | mRNA | downstream | 934431 | 31710064 ~ 31727552 (-) | True | nmnat2 |
XM_034303857.1 | mRNA | downstream | 1117349 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
XM_026936953.2 | mRNA | downstream | 1128725 | 31528370 ~ 31533258 (-) | True | psmb5 |
XM_034304039.1 | mRNA | downstream | 1192342 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
XM_034303863.1 | mRNA | upstream | 161082 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
XM_034303864.1 | mRNA | upstream | 310309 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
XM_026912180.2 | mRNA | upstream | 468611 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
XM_026912181.2 | mRNA | upstream | 468611 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
XM_026912179.2 | mRNA | upstream | 468611 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
LOC117597135 | other | downstream | 3061 | 32658361 ~ 32658922 (-) | True | LOC117597135 |
TU88461 | other | downstream | 17449 | 32644024 ~ 32644534 (-) | True | G74644 |
LOC117596950 | other | downstream | 28272 | 32633213 ~ 32633711 (-) | True | LOC117596950 |
TU88440 | other | downstream | 458078 | 32203394 ~ 32203905 (-) | True | LOC117596946 |
TU88466 | other | upstream | 2422 | 32664898 ~ 32665420 (-) | False | LOC117596929 |
LOC117596927 | other | upstream | 114490 | 32776966 ~ 32777798 (-) | True | LOC117596927 |
LOC117596938 | other | upstream | 141078 | 32803554 ~ 32804222 (-) | True | LOC117596938 |
LOC117596923 | other | upstream | 147120 | 32809596 ~ 32810296 (-) | True | LOC117596923 |
LOC117597139 | other | upstream | 147956 | 32810432 ~ 32811735 (-) | True | LOC117597139 |