Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU88351 |
| length | 363 |
| RNA type | TUCP |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC117597010 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 31870518 ~ 31871874 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88244 | lncRNA | downstream | 85402 | 31736292 ~ 31785757 (-) | True | G74458 |
| TU88242 | lncRNA | downstream | 114855 | 31753121 ~ 31756304 (-) | True | G74457 |
| TU88243 | lncRNA | downstream | 114855 | 31753121 ~ 31756304 (-) | False | G74457 |
| TU88271 | lncRNA | downstream | 125697 | 31744351 ~ 31745462 (-) | True | G74479 |
| TU88199 | lncRNA | downstream | 220575 | 31567051 ~ 31650584 (-) | True | G74417 |
| TU88356 | lncRNA | upstream | 22212 | 31893851 ~ 31901557 (-) | True | G74553 |
| XR_004578081.1 | lncRNA | upstream | 37009 | 31908648 ~ 31909914 (-) | False | LOC117597178 |
| XR_004578080.1 | lncRNA | upstream | 37009 | 31908648 ~ 31909914 (-) | False | LOC117597178 |
| XR_004578079.1 | lncRNA | upstream | 37009 | 31908648 ~ 31909914 (-) | True | LOC117597178 |
| XR_004577914.1 | lncRNA | upstream | 239947 | 32111586 ~ 32112411 (-) | True | LOC113540655 |
| XM_026935889.2 | mRNA | downstream | 143607 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 326525 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 337901 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_034304039.1 | mRNA | downstream | 401518 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
| XM_034303863.1 | mRNA | upstream | 951919 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
| XM_034303864.1 | mRNA | upstream | 1101146 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
| XM_026912180.2 | mRNA | upstream | 1259448 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 1259448 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 1259448 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| LOC113540068 | other | downstream | 1151 | 31867082 ~ 31870008 (-) | True | LOC113540068 |
| TU87656 | other | downstream | 1095340 | 30773463 ~ 30775819 (-) | True | ccl20l |
| TU87613 | other | downstream | 1127333 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
| TU87233 | other | downstream | 1848634 | 30019506 ~ 30022525 (-) | True | G73619 |
| XR_003403975.2 | other | downstream | 2140302 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| TU88350 | other | upstream | 2670 | 31874309 ~ 31874827 (-) | True | G74547 |
| TU88353 | other | upstream | 8395 | 31880034 ~ 31880556 (-) | True | G74550 |
| LOC117597011 | other | upstream | 11304 | 31882943 ~ 31883607 (-) | True | LOC117597011 |
| LOC117597121 | other | upstream | 33987 | 31905626 ~ 31910974 (-) | True | LOC117597121 |
| LOC117597180 | other | upstream | 59666 | 31931305 ~ 31932063 (-) | True | LOC117597180 |
