Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68217 |
| length | 615 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 4 |
| gene id | G57733 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 300980 ~ 856952 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68338 | lncRNA | downstream | 3001 | 492652 ~ 518985 (-) | True | G57810 |
| TU68239 | lncRNA | downstream | 7721 | 480920 ~ 514265 (-) | False | G57733 |
| XR_004577979.1 | lncRNA | downstream | 11983 | 498209 ~ 510003 (-) | True | LOC117597030 |
| TU68311 | lncRNA | downstream | 18105 | 457489 ~ 503881 (-) | False | G57792 |
| TU68333 | lncRNA | downstream | 20780 | 454842 ~ 501206 (-) | True | G57805 |
| TU68224 | lncRNA | upstream | 10346 | 709683 ~ 761025 (-) | False | G57733 |
| TU68381 | lncRNA | upstream | 35584 | 734921 ~ 738411 (-) | True | LOC117597026 |
| XR_004577973.1 | lncRNA | upstream | 38832 | 738169 ~ 740709 (-) | False | LOC117597026 |
| TU68382 | lncRNA | upstream | 40682 | 740019 ~ 740760 (-) | False | LOC117597026 |
| TU68383 | lncRNA | upstream | 40682 | 740019 ~ 748267 (-) | False | LOC117597026 |
| XM_034303482.1 | mRNA | downstream | 24423 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 25182 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 70293 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 70295 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 73415 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303503.1 | mRNA | upstream | 712 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 11022 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 11028 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 148736 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 164041 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68328 | other | downstream | 25134 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 223530 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 423869 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68254 | other | upstream | 34218 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 140095 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 342440 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 992989 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1300641 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
