Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68224 |
| length | 893 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G57733 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 300980 ~ 856952 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68340 | lncRNA | downstream | 1447 | 501545 ~ 708236 (-) | False | G57811 |
| TU68339 | lncRNA | downstream | 1447 | 695573 ~ 708236 (-) | True | G57811 |
| TU68217 | lncRNA | downstream | 10346 | 521986 ~ 699337 (-) | False | G57733 |
| XR_004577967.1 | lncRNA | downstream | 10451 | 696118 ~ 699232 (-) | True | LOC117597022 |
| TU68261 | lncRNA | downstream | 11411 | 452633 ~ 698272 (-) | True | G57747 |
| TU68385 | lncRNA | upstream | 6180 | 767205 ~ 767558 (-) | True | G57844 |
| TU68389 | lncRNA | upstream | 61225 | 822250 ~ 825864 (-) | True | G57848 |
| TU68391 | lncRNA | upstream | 61755 | 822780 ~ 824304 (-) | True | G57849 |
| TU68393 | lncRNA | upstream | 66296 | 827321 ~ 841661 (-) | True | G57850 |
| TU68256 | lncRNA | upstream | 96722 | 857747 ~ 861437 (-) | True | G57742 |
| XM_034303503.1 | mRNA | downstream | 5305 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303482.1 | mRNA | downstream | 212120 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 212879 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 257990 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 257992 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 87048 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 102353 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 102353 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 102353 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 164009 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68368 | other | downstream | 95440 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 212831 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 411227 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 611566 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68216 | other | upstream | 78407 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 280752 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 931301 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1238953 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1309999 | 2071024 ~ 2083929 (-) | False | G58534 |
