Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68230 |
| length | 684 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 5 |
| gene id | G57733 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 300980 ~ 856952 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68338 | lncRNA | downstream | 3001 | 492652 ~ 518985 (-) | True | G57810 |
| TU68239 | lncRNA | downstream | 7721 | 480920 ~ 514265 (-) | False | G57733 |
| XR_004577979.1 | lncRNA | downstream | 11983 | 498209 ~ 510003 (-) | True | LOC117597030 |
| TU68311 | lncRNA | downstream | 18105 | 457489 ~ 503881 (-) | False | G57792 |
| TU68333 | lncRNA | downstream | 20780 | 454842 ~ 501206 (-) | True | G57805 |
| TU68346 | lncRNA | upstream | 6065 | 544163 ~ 826584 (-) | True | G57816 |
| TU68269 | lncRNA | upstream | 14001 | 552099 ~ 595196 (-) | True | G57755 |
| TU68348 | lncRNA | upstream | 15671 | 553769 ~ 599202 (-) | True | G57818 |
| TU68349 | lncRNA | upstream | 16520 | 554618 ~ 599202 (-) | False | G57818 |
| TU68351 | lncRNA | upstream | 19044 | 557142 ~ 587403 (-) | False | G57820 |
| XM_034303482.1 | mRNA | downstream | 24423 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 25182 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 70293 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 70295 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 73415 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303503.1 | mRNA | upstream | 161951 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 172261 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 172267 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 309975 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 325280 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68328 | other | downstream | 25134 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 223530 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 423869 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68368 | other | upstream | 74145 | 612243 ~ 614243 (-) | True | G57830 |
| TU68378 | other | upstream | 145390 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | upstream | 195457 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 301334 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 503679 | 1041777 ~ 1048841 (-) | False | G57868 |
