Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68245 |
| length | 696 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 4 |
| gene id | G57735 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 646698 ~ 781611 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68369 | lncRNA | downstream | 15390 | 618285 ~ 631308 (-) | False | G57831 |
| TU68372 | lncRNA | downstream | 26560 | 619705 ~ 620138 (-) | True | G57832 |
| TU68354 | lncRNA | downstream | 27843 | 559634 ~ 618855 (-) | False | G57821 |
| TU68356 | lncRNA | downstream | 36335 | 558894 ~ 610363 (-) | True | G57822 |
| TU68366 | lncRNA | downstream | 46422 | 599622 ~ 600276 (-) | True | G57828 |
| TU68389 | lncRNA | upstream | 40639 | 822250 ~ 825864 (-) | True | G57848 |
| TU68391 | lncRNA | upstream | 41169 | 822780 ~ 824304 (-) | True | G57849 |
| TU68393 | lncRNA | upstream | 45710 | 827321 ~ 841661 (-) | True | G57850 |
| TU68256 | lncRNA | upstream | 76136 | 857747 ~ 861437 (-) | True | G57742 |
| TU68404 | lncRNA | upstream | 127906 | 909517 ~ 910029 (-) | True | G57861 |
| XM_034303482.1 | mRNA | downstream | 149135 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 149894 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 195005 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 195007 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 198127 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 66462 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 81767 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 81767 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 81767 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 143423 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68368 | other | downstream | 32455 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 149846 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 348242 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 548581 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68216 | other | upstream | 57821 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 260166 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 910715 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1218367 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1289413 | 2071024 ~ 2083929 (-) | False | G58534 |
