Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68306 |
| length | 267 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | LOC117597013 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 375243 ~ 451693 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68302 | lncRNA | downstream | 14141 | 360739 ~ 361102 (-) | True | G57786 |
| TU68240 | lncRNA | downstream | 14510 | 300980 ~ 360733 (-) | False | G57733 |
| TU68294 | lncRNA | downstream | 18189 | 326345 ~ 357054 (-) | True | G57778 |
| TU68292 | lncRNA | downstream | 22558 | 317492 ~ 352685 (-) | True | G57776 |
| TU68164 | lncRNA | downstream | 92260 | 279982 ~ 282983 (-) | False | eif2b5 |
| TU68261 | lncRNA | upstream | 968 | 452633 ~ 698272 (-) | True | G57747 |
| TU68333 | lncRNA | upstream | 3177 | 454842 ~ 501206 (-) | True | G57805 |
| TU68311 | lncRNA | upstream | 5824 | 457489 ~ 503881 (-) | False | G57792 |
| TU68336 | lncRNA | upstream | 19184 | 470849 ~ 471624 (-) | True | G57808 |
| TU68239 | lncRNA | upstream | 29255 | 480920 ~ 514265 (-) | False | G57733 |
| XM_034303483.1 | mRNA | downstream | 1215 | 347059 ~ 374028 (-) | False | LOC117597012 |
| XM_034303488.1 | mRNA | downstream | 1217 | 347059 ~ 374026 (-) | False | LOC117597012 |
| XM_034303481.1 | mRNA | downstream | 1780 | 347059 ~ 373463 (-) | False | LOC117597012 |
| XM_034303480.1 | mRNA | downstream | 1781 | 347059 ~ 373462 (-) | False | LOC117597012 |
| XM_034303490.1 | mRNA | downstream | 1782 | 347059 ~ 373461 (-) | False | LOC117597012 |
| XM_034303503.1 | mRNA | upstream | 248384 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 258694 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 258700 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 396408 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 411713 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68285 | other | downstream | 76787 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 277126 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68368 | other | upstream | 160578 | 612243 ~ 614243 (-) | True | G57830 |
| TU68378 | other | upstream | 231823 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | upstream | 281890 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 387767 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 590112 | 1041777 ~ 1048841 (-) | False | G57868 |
