Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68274 |
| length | 824 |
| lncRNA type | read_through |
| GC content | 0.42 |
| exon number | 4 |
| gene id | G57760 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 336270 ~ 421309 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68164 | lncRNA | downstream | 53287 | 279982 ~ 282983 (-) | False | eif2b5 |
| TU68191 | lncRNA | downstream | 73934 | 222221 ~ 262336 (-) | False | G57727 |
| TU68179 | lncRNA | downstream | 79594 | 213341 ~ 256676 (-) | True | G57723 |
| XR_004577972.1 | lncRNA | upstream | 421 | 421730 ~ 426085 (-) | True | LOC117597025 |
| TU68314 | lncRNA | upstream | 5906 | 427215 ~ 429536 (-) | True | G57793 |
| TU68324 | lncRNA | upstream | 8651 | 429960 ~ 435673 (-) | True | G57799 |
| TU68325 | lncRNA | upstream | 18969 | 440278 ~ 479284 (-) | True | G57800 |
| TU68203 | lncRNA | upstream | 19990 | 441299 ~ 711807 (-) | False | G57733 |
| XM_034303501.1 | mRNA | downstream | 14581 | 303683 ~ 321689 (-) | True | LOC117597016 |
| XM_034303516.1 | mRNA | downstream | 36253 | 280534 ~ 300017 (-) | True | eif2b5 |
| XM_034303964.1 | mRNA | downstream | 63650 | 262446 ~ 272620 (-) | True | LOC113525282 |
| XM_026911758.2 | mRNA | downstream | 69983 | 262446 ~ 266287 (-) | False | LOC113525282 |
| XM_026911766.2 | mRNA | downstream | 155995 | 177871 ~ 180275 (-) | True | LOC113525290 |
| XM_034303503.1 | mRNA | upstream | 278740 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 289050 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 289056 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 426764 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 442069 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68285 | other | downstream | 37814 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 238153 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68328 | other | upstream | 27416 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68368 | other | upstream | 190934 | 612243 ~ 614243 (-) | True | G57830 |
| TU68378 | other | upstream | 262179 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | upstream | 312246 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 418123 | 839432 ~ 856952 (-) | False | G57733 |
