Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68340 |
| length | 1141 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 4 |
| gene id | G57811 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 501545 ~ 708236 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68333 | lncRNA | downstream | 339 | 454842 ~ 501206 (-) | True | G57805 |
| TU68305 | lncRNA | downstream | 4444 | 374455 ~ 497101 (-) | True | G57788 |
| XR_004577966.1 | lncRNA | downstream | 19470 | 481275 ~ 482075 (-) | True | LOC117597021 |
| TU68325 | lncRNA | downstream | 22261 | 440278 ~ 479284 (-) | True | G57800 |
| TU68316 | lncRNA | downstream | 27287 | 389331 ~ 474258 (-) | False | G57794 |
| TU68224 | lncRNA | upstream | 1447 | 709683 ~ 761025 (-) | False | G57733 |
| TU68381 | lncRNA | upstream | 26685 | 734921 ~ 738411 (-) | True | LOC117597026 |
| XR_004577973.1 | lncRNA | upstream | 29933 | 738169 ~ 740709 (-) | False | LOC117597026 |
| TU68382 | lncRNA | upstream | 31783 | 740019 ~ 740760 (-) | False | LOC117597026 |
| TU68383 | lncRNA | upstream | 31783 | 740019 ~ 748267 (-) | False | LOC117597026 |
| XM_034303482.1 | mRNA | downstream | 3982 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 4741 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 49852 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 49854 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 52974 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303500.1 | mRNA | upstream | 2123 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 2129 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 139837 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 155142 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 155142 | 863378 ~ 886350 (-) | False | dis3l2 |
| TU68328 | other | downstream | 4693 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 203089 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 403428 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68254 | other | upstream | 25319 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 131196 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 333541 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 984090 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1291742 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
