Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68379 |
| length | 270 |
| lncRNA type | read_through |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G57839 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 689092 ~ 748045 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68275 | lncRNA | downstream | 14604 | 600626 ~ 674488 (-) | True | G57761 |
| TU68377 | lncRNA | downstream | 15369 | 672869 ~ 673723 (-) | True | G57837 |
| TU68376 | lncRNA | downstream | 16295 | 672019 ~ 672797 (-) | True | G57836 |
| TU68369 | lncRNA | downstream | 57784 | 618285 ~ 631308 (-) | False | G57831 |
| TU68372 | lncRNA | downstream | 68954 | 619705 ~ 620138 (-) | True | G57832 |
| TU68384 | lncRNA | upstream | 3541 | 751586 ~ 752375 (-) | True | G57843 |
| TU68385 | lncRNA | upstream | 19160 | 767205 ~ 767558 (-) | True | G57844 |
| TU68389 | lncRNA | upstream | 74205 | 822250 ~ 825864 (-) | True | G57848 |
| TU68391 | lncRNA | upstream | 74735 | 822780 ~ 824304 (-) | True | G57849 |
| TU68393 | lncRNA | upstream | 79276 | 827321 ~ 841661 (-) | True | G57850 |
| XM_034303482.1 | mRNA | downstream | 191529 | 347059 ~ 497563 (-) | False | LOC117597012 |
| XM_034303484.1 | mRNA | downstream | 192288 | 347059 ~ 496804 (-) | True | LOC117597012 |
| XM_034303497.1 | mRNA | downstream | 237399 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 237401 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 240521 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 100028 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 115333 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 115333 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 115333 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 176989 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68368 | other | downstream | 74849 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 192240 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 390636 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 590975 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68216 | other | upstream | 91387 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 293732 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 944281 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1251933 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1322979 | 2071024 ~ 2083929 (-) | False | G58534 |
