Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68383 |
| length | 301 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC117597026 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 734921 ~ 748267 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68381 | lncRNA | downstream | 1608 | 734921 ~ 738411 (-) | True | LOC117597026 |
| TU68263 | lncRNA | downstream | 8178 | 668495 ~ 731841 (-) | True | G57749 |
| TU68257 | lncRNA | downstream | 9838 | 647016 ~ 730181 (-) | True | G57743 |
| TU68242 | lncRNA | downstream | 9928 | 646698 ~ 730091 (-) | False | G57735 |
| TU68253 | lncRNA | downstream | 10284 | 665434 ~ 729735 (-) | True | G57739 |
| TU68384 | lncRNA | upstream | 3319 | 751586 ~ 752375 (-) | True | G57843 |
| TU68385 | lncRNA | upstream | 18938 | 767205 ~ 767558 (-) | True | G57844 |
| TU68389 | lncRNA | upstream | 73983 | 822250 ~ 825864 (-) | True | G57848 |
| TU68391 | lncRNA | upstream | 74513 | 822780 ~ 824304 (-) | True | G57849 |
| TU68393 | lncRNA | upstream | 79054 | 827321 ~ 841661 (-) | True | G57850 |
| XM_034303500.1 | mRNA | downstream | 20412 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | downstream | 20412 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303503.1 | mRNA | downstream | 35641 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303492.1 | mRNA | downstream | 334255 | 395440 ~ 405764 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 99806 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 115111 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 115111 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 115111 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 176767 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68254 | other | downstream | 5248 | 733555 ~ 734771 (-) | True | G57740 |
| TU68368 | other | downstream | 125776 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 243167 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 441563 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 641902 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68216 | other | upstream | 91165 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 293510 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 944059 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1251711 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1322757 | 2071024 ~ 2083929 (-) | False | G58534 |
