Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68385 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G57844 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 767205 ~ 767558 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68224 | lncRNA | downstream | 6180 | 709683 ~ 761025 (-) | False | G57733 |
| TU68384 | lncRNA | downstream | 14830 | 751586 ~ 752375 (-) | True | G57843 |
| TU68361 | lncRNA | downstream | 18605 | 640677 ~ 748600 (-) | False | G57823 |
| TU68383 | lncRNA | downstream | 18938 | 740019 ~ 748267 (-) | False | LOC117597026 |
| TU68379 | lncRNA | downstream | 19160 | 689092 ~ 748045 (-) | True | G57839 |
| TU68389 | lncRNA | upstream | 54692 | 822250 ~ 825864 (-) | True | G57848 |
| TU68391 | lncRNA | upstream | 55222 | 822780 ~ 824304 (-) | True | G57849 |
| TU68393 | lncRNA | upstream | 59763 | 827321 ~ 841661 (-) | True | G57850 |
| TU68256 | lncRNA | upstream | 90189 | 857747 ~ 861437 (-) | True | G57742 |
| TU68404 | lncRNA | upstream | 141959 | 909517 ~ 910029 (-) | True | G57861 |
| XM_034303500.1 | mRNA | downstream | 47598 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | downstream | 47598 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303503.1 | mRNA | downstream | 62827 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303492.1 | mRNA | downstream | 361441 | 395440 ~ 405764 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 80515 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 95820 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 95820 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 95820 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 157476 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68378 | other | downstream | 21174 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | downstream | 32434 | 733555 ~ 734771 (-) | True | G57740 |
| TU68368 | other | downstream | 152962 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 270353 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 468749 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU68216 | other | upstream | 71874 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 274219 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 924768 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1232420 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1303466 | 2071024 ~ 2083929 (-) | False | G58534 |
