Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68389 |
| length | 232 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G57848 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 822250 ~ 825864 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68364 | lncRNA | downstream | 13493 | 574040 ~ 808757 (-) | True | G57826 |
| TU68265 | lncRNA | downstream | 22731 | 591727 ~ 799519 (-) | True | G57751 |
| TU68234 | lncRNA | downstream | 26568 | 300980 ~ 795682 (-) | True | G57733 |
| TU68245 | lncRNA | downstream | 40639 | 646698 ~ 781611 (-) | True | G57735 |
| TU68385 | lncRNA | downstream | 54692 | 767205 ~ 767558 (-) | True | G57844 |
| TU68393 | lncRNA | upstream | 1457 | 827321 ~ 841661 (-) | True | G57850 |
| TU68256 | lncRNA | upstream | 31883 | 857747 ~ 861437 (-) | True | G57742 |
| TU68404 | lncRNA | upstream | 83653 | 909517 ~ 910029 (-) | True | G57861 |
| TU68417 | lncRNA | upstream | 160047 | 985911 ~ 1044147 (-) | True | G57868 |
| TU68271 | lncRNA | upstream | 184361 | 1010225 ~ 1011047 (-) | False | LOC117597039 |
| XM_034303500.1 | mRNA | downstream | 102643 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | downstream | 102643 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303503.1 | mRNA | downstream | 117872 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303492.1 | mRNA | downstream | 416486 | 395440 ~ 405764 (-) | False | LOC117597013 |
| XM_034303498.1 | mRNA | upstream | 22209 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 37514 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | upstream | 37514 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | upstream | 37514 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303352.1 | mRNA | upstream | 99170 | 925034 ~ 933915 (-) | True | LOC113524111 |
| TU68378 | other | downstream | 76219 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | downstream | 87479 | 733555 ~ 734771 (-) | True | G57740 |
| TU68368 | other | downstream | 208007 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 325398 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68285 | other | downstream | 523794 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU68216 | other | upstream | 13568 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 215913 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 866462 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1174114 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1245160 | 2071024 ~ 2083929 (-) | False | G58534 |
