Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU68404 |
| length | 390 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G57861 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 909517 ~ 910029 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68256 | lncRNA | downstream | 48080 | 857747 ~ 861437 (-) | True | G57742 |
| TU68259 | lncRNA | downstream | 63501 | 507094 ~ 846016 (-) | True | G57745 |
| TU68393 | lncRNA | downstream | 67856 | 827321 ~ 841661 (-) | True | G57850 |
| TU68346 | lncRNA | downstream | 82933 | 544163 ~ 826584 (-) | True | G57816 |
| TU68389 | lncRNA | downstream | 83653 | 822250 ~ 825864 (-) | True | G57848 |
| TU68417 | lncRNA | upstream | 75882 | 985911 ~ 1044147 (-) | True | G57868 |
| TU68271 | lncRNA | upstream | 100196 | 1010225 ~ 1011047 (-) | False | LOC117597039 |
| TU68426 | lncRNA | upstream | 102885 | 1012914 ~ 1013189 (-) | True | G57877 |
| XR_004577952.1 | lncRNA | upstream | 128996 | 1039025 ~ 1040876 (-) | True | LOC117596994 |
| TU68447 | lncRNA | upstream | 165192 | 1075221 ~ 1075426 (-) | True | G57895 |
| XM_034303472.1 | mRNA | downstream | 23122 | 863378 ~ 886395 (-) | False | dis3l2 |
| XM_034303471.1 | mRNA | downstream | 23167 | 863378 ~ 886350 (-) | False | dis3l2 |
| XM_034303473.1 | mRNA | downstream | 23266 | 863378 ~ 886251 (-) | True | dis3l2 |
| XM_034303498.1 | mRNA | downstream | 52317 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303500.1 | mRNA | downstream | 189910 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303352.1 | mRNA | upstream | 15005 | 925034 ~ 933915 (-) | True | LOC113524111 |
| XM_026910270.2 | mRNA | upstream | 27131 | 937160 ~ 942590 (-) | True | LOC113524137 |
| XM_026910273.2 | mRNA | upstream | 35015 | 945044 ~ 961033 (-) | True | LOC113524140 |
| XM_026910250.2 | mRNA | upstream | 57001 | 967030 ~ 981643 (-) | True | LOC113524120 |
| XM_026910251.2 | mRNA | upstream | 76061 | 986090 ~ 992953 (-) | True | higd1a |
| TU68216 | other | downstream | 52565 | 839432 ~ 856952 (-) | False | G57733 |
| TU68378 | other | downstream | 163486 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | downstream | 174746 | 733555 ~ 734771 (-) | True | G57740 |
| TU68368 | other | downstream | 295274 | 612243 ~ 614243 (-) | True | G57830 |
| TU68328 | other | downstream | 412665 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68413 | other | upstream | 131748 | 1041777 ~ 1048841 (-) | False | G57868 |
| TU68836 | other | upstream | 782297 | 1692326 ~ 1692997 (-) | True | G58190 |
| trnav-cac_1 | other | upstream | 1089949 | 1999978 ~ 2000050 (-) | True | trnav-cac_1 |
| TU69291 | other | upstream | 1160995 | 2071024 ~ 2083929 (-) | False | G58534 |
| TU69336 | other | upstream | 1294523 | 2204552 ~ 2222099 (-) | False | LOC113523983 |
