Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70066 |
| length | 423 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC117597092 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 3894592 ~ 3920131 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU69902 | lncRNA | downstream | 295000 | 3599986 ~ 3600201 (-) | True | G59075 |
| TU69791 | lncRNA | downstream | 614626 | 3248427 ~ 3280575 (-) | True | G58969 |
| TU69763 | lncRNA | downstream | 619130 | 3267913 ~ 3276071 (-) | False | ptprn2 |
| TU69787 | lncRNA | downstream | 664881 | 3229450 ~ 3230320 (-) | True | G58965 |
| TU69781 | lncRNA | downstream | 705074 | 3188324 ~ 3190127 (-) | True | G58960 |
| TU70071 | lncRNA | upstream | 8916 | 3929047 ~ 3957093 (-) | False | LOC113547221 |
| TU70076 | lncRNA | upstream | 21408 | 3941539 ~ 3943736 (-) | True | LOC117597096 |
| XR_004578029.1 | lncRNA | upstream | 21564 | 3941695 ~ 3943736 (-) | False | LOC117597096 |
| XR_004578030.1 | lncRNA | upstream | 21564 | 3941695 ~ 3943736 (-) | False | LOC117597096 |
| XR_004578027.1 | lncRNA | upstream | 226685 | 4146816 ~ 4155085 (-) | False | LOC117597094 |
| XM_034303814.1 | mRNA | downstream | 184654 | 3704774 ~ 3710547 (-) | True | LOC113525490 |
| XM_034303798.1 | mRNA | downstream | 255993 | 3632029 ~ 3639208 (-) | False | si:ch73-174h16.4 |
| XM_034303794.1 | mRNA | downstream | 312189 | 3538315 ~ 3583012 (-) | True | esyt2b |
| XM_034303572.1 | mRNA | downstream | 360382 | 3526493 ~ 3534819 (-) | True | LOC117597049 |
| XM_034303554.1 | mRNA | downstream | 408850 | 3460872 ~ 3486351 (-) | True | ncapg2 |
| XM_034303797.1 | mRNA | upstream | 251068 | 4171199 ~ 4210106 (-) | True | LOC113547240 |
| XM_034303795.1 | mRNA | upstream | 310354 | 4230485 ~ 4256278 (-) | True | LOC113537670 |
| XM_034303587.1 | mRNA | upstream | 349037 | 4269168 ~ 4284392 (-) | True | LOC117597053 |
| XM_026947467.2 | mRNA | upstream | 594472 | 4514603 ~ 4527107 (-) | True | maf1b |
| XM_034303593.1 | mRNA | upstream | 640657 | 4560788 ~ 4571827 (-) | True | LOC117597059 |
| XR_004578034.1 | other | downstream | 170636 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
| XR_004578021.1 | other | downstream | 255993 | 3629988 ~ 3639208 (-) | True | si:ch73-174h16.4 |
| TU69907 | other | downstream | 261968 | 3630059 ~ 3633233 (-) | False | si:ch73-174h16.4 |
| TU69894 | other | downstream | 304464 | 3586783 ~ 3590737 (-) | True | G59069 |
| TU69489 | other | downstream | 1077651 | 2814990 ~ 2817550 (-) | True | G58696 |
| TU70112 | other | upstream | 312519 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU70115 | other | upstream | 318266 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70276 | other | upstream | 726325 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnar-ucg_1 | other | upstream | 889661 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70820 | other | upstream | 1558411 | 5478542 ~ 5485797 (-) | False | cldn1 |
