Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578027.1 |
| length | 301 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 4 |
| gene id | LOC117597094 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4146816 ~ 4155085 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70071 | lncRNA | downstream | 189723 | 3929047 ~ 3957093 (-) | False | LOC113547221 |
| TU70076 | lncRNA | downstream | 203080 | 3941539 ~ 3943736 (-) | True | LOC117597096 |
| XR_004578029.1 | lncRNA | downstream | 203080 | 3941695 ~ 3943736 (-) | False | LOC117597096 |
| XR_004578030.1 | lncRNA | downstream | 203080 | 3941695 ~ 3943736 (-) | False | LOC117597096 |
| TU70070 | lncRNA | downstream | 229117 | 3916203 ~ 3917699 (-) | False | LOC113547221 |
| TU70101 | lncRNA | upstream | 17914 | 4172999 ~ 4173489 (-) | False | LOC113547240 |
| TU70102 | lncRNA | upstream | 23613 | 4178698 ~ 4200009 (-) | False | LOC113547240 |
| TU70104 | lncRNA | upstream | 42243 | 4197328 ~ 4198139 (-) | True | G59249 |
| TU70105 | lncRNA | upstream | 43128 | 4198213 ~ 4238325 (-) | False | LOC113537670 |
| XR_003403771.2 | lncRNA | upstream | 66792 | 4221877 ~ 4223455 (-) | True | LOC113537515 |
| XM_034303809.1 | mRNA | downstream | 238737 | 3894592 ~ 3908079 (-) | True | LOC117597092 |
| XM_034303814.1 | mRNA | downstream | 436269 | 3704774 ~ 3710547 (-) | True | LOC113525490 |
| XM_034303798.1 | mRNA | downstream | 507608 | 3632029 ~ 3639208 (-) | False | si:ch73-174h16.4 |
| XM_034303794.1 | mRNA | downstream | 563804 | 3538315 ~ 3583012 (-) | True | esyt2b |
| XM_034303572.1 | mRNA | downstream | 611997 | 3526493 ~ 3534819 (-) | True | LOC117597049 |
| XM_034303797.1 | mRNA | upstream | 16114 | 4171199 ~ 4210106 (-) | True | LOC113547240 |
| XM_034303795.1 | mRNA | upstream | 75400 | 4230485 ~ 4256278 (-) | True | LOC113537670 |
| XM_034303587.1 | mRNA | upstream | 114083 | 4269168 ~ 4284392 (-) | True | LOC117597053 |
| XM_026947467.2 | mRNA | upstream | 359518 | 4514603 ~ 4527107 (-) | True | maf1b |
| XM_034303593.1 | mRNA | upstream | 405703 | 4560788 ~ 4571827 (-) | True | LOC117597059 |
| TU70066 | other | downstream | 226685 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
| XR_004578034.1 | other | downstream | 422251 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
| XR_004578021.1 | other | downstream | 507608 | 3629988 ~ 3639208 (-) | True | si:ch73-174h16.4 |
| TU69907 | other | downstream | 513583 | 3630059 ~ 3633233 (-) | False | si:ch73-174h16.4 |
| TU69894 | other | downstream | 556079 | 3586783 ~ 3590737 (-) | True | G59069 |
| TU70112 | other | upstream | 77565 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU70115 | other | upstream | 83312 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70276 | other | upstream | 491371 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnar-ucg_1 | other | upstream | 654707 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70820 | other | upstream | 1323457 | 5478542 ~ 5485797 (-) | False | cldn1 |
