Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70112 |
| length | 625 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 6 |
| gene id | LOC113537670 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4198213 ~ 4256284 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403771.2 | lncRNA | downstream | 9195 | 4221877 ~ 4223455 (-) | True | LOC113537515 |
| TU70102 | lncRNA | downstream | 32641 | 4178698 ~ 4200009 (-) | False | LOC113547240 |
| TU70104 | lncRNA | downstream | 34511 | 4197328 ~ 4198139 (-) | True | G59249 |
| TU70101 | lncRNA | downstream | 59161 | 4172999 ~ 4173489 (-) | False | LOC113547240 |
| XR_004578027.1 | lncRNA | downstream | 77565 | 4146816 ~ 4155085 (-) | False | LOC117597094 |
| TU70120 | lncRNA | upstream | 94852 | 4330091 ~ 4374638 (-) | True | G59264 |
| XR_004578035.1 | lncRNA | upstream | 102009 | 4337248 ~ 4338266 (-) | True | LOC117597101 |
| TU70129 | lncRNA | upstream | 127845 | 4363084 ~ 4411032 (-) | True | LOC117597095 |
| XR_004578028.1 | lncRNA | upstream | 174281 | 4409520 ~ 4410821 (-) | False | LOC117597095 |
| TU70151 | lncRNA | upstream | 251278 | 4486517 ~ 4487970 (-) | True | G59287 |
| XM_034303797.1 | mRNA | downstream | 22544 | 4171199 ~ 4210106 (-) | True | LOC113547240 |
| XM_034303809.1 | mRNA | downstream | 324571 | 3894592 ~ 3908079 (-) | True | LOC117597092 |
| XM_034303814.1 | mRNA | downstream | 522103 | 3704774 ~ 3710547 (-) | True | LOC113525490 |
| XM_034303798.1 | mRNA | downstream | 593442 | 3632029 ~ 3639208 (-) | False | si:ch73-174h16.4 |
| XM_034303794.1 | mRNA | downstream | 649638 | 3538315 ~ 3583012 (-) | True | esyt2b |
| XM_034303587.1 | mRNA | upstream | 33929 | 4269168 ~ 4284392 (-) | True | LOC117597053 |
| XM_026947467.2 | mRNA | upstream | 279364 | 4514603 ~ 4527107 (-) | True | maf1b |
| XM_034303593.1 | mRNA | upstream | 325549 | 4560788 ~ 4571827 (-) | True | LOC117597059 |
| XM_034304010.1 | mRNA | upstream | 369933 | 4605172 ~ 4609562 (-) | False | LOC113547216 |
| XM_034304009.1 | mRNA | upstream | 369933 | 4605172 ~ 4609562 (-) | True | LOC113547216 |
| TU70066 | other | downstream | 312519 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
| XR_004578034.1 | other | downstream | 508085 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
| XR_004578021.1 | other | downstream | 593442 | 3629988 ~ 3639208 (-) | True | si:ch73-174h16.4 |
| TU69907 | other | downstream | 599417 | 3630059 ~ 3633233 (-) | False | si:ch73-174h16.4 |
| TU69894 | other | downstream | 641913 | 3586783 ~ 3590737 (-) | True | G59069 |
| TU70115 | other | upstream | 3158 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70276 | other | upstream | 411217 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnar-ucg_1 | other | upstream | 574553 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70820 | other | upstream | 1243303 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71182 | other | upstream | 1665010 | 5900249 ~ 5930199 (-) | True | G60166 |
