Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70199 |
| length | 253 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G59329 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4677167 ~ 4698795 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70216 | lncRNA | upstream | 5707 | 4670980 ~ 4671460 (+) | True | G59343 |
| TU70215 | lncRNA | upstream | 7084 | 4669863 ~ 4670083 (+) | True | G59342 |
| TU70213 | lncRNA | upstream | 10712 | 4666012 ~ 4666455 (+) | True | G59340 |
| TU70208 | lncRNA | upstream | 12701 | 4663611 ~ 4664466 (+) | True | G59338 |
| TU70170 | lncRNA | upstream | 121568 | 4555395 ~ 4555599 (+) | True | G59304 |
| TU70374 | lncRNA | downstream | 251505 | 4950300 ~ 4950651 (+) | True | G59478 |
| TU70375 | lncRNA | downstream | 253576 | 4952371 ~ 4952598 (+) | True | G59479 |
| TU70379 | lncRNA | downstream | 259267 | 4958062 ~ 4958314 (+) | True | G59483 |
| TU70396 | lncRNA | downstream | 294694 | 4993489 ~ 5014813 (+) | False | G59492 |
| TU70430 | lncRNA | downstream | 313125 | 5011920 ~ 5017802 (+) | True | G59521 |
| XM_026947464.2 | mRNA | upstream | 124129 | 4532921 ~ 4553038 (+) | False | shrprbck1r |
| XM_026947463.2 | mRNA | upstream | 124129 | 4532922 ~ 4553038 (+) | False | shrprbck1r |
| XM_034303800.1 | mRNA | upstream | 163704 | 4475196 ~ 4513463 (+) | True | LOC117597089 |
| XM_026947552.2 | mRNA | downstream | 40775 | 4739570 ~ 4746302 (+) | True | mnx1 |
| XM_034303594.1 | mRNA | downstream | 75391 | 4774186 ~ 4789253 (+) | True | LOC113547242 |
| XM_034303595.1 | mRNA | downstream | 106859 | 4805654 ~ 4866411 (+) | True | LOC113547214 |
| XM_026947547.2 | mRNA | downstream | 181005 | 4879800 ~ 4894423 (+) | True | si:ch211-188c16.1 |
| XM_026947564.2 | mRNA | downstream | 198173 | 4896968 ~ 4913622 (+) | True | LOC113547295 |
| XR_004578071.1 | other | upstream | 24046 | 4650477 ~ 4653121 (+) | True | LOC117597167 |
| XR_003404798.2 | other | upstream | 124129 | 4532921 ~ 4553038 (+) | True | shrprbck1r |
| XR_004578033.1 | other | upstream | 670826 | 4005153 ~ 4006341 (+) | True | LOC117597099 |
| TU69947 | other | upstream | 824600 | 3850423 ~ 3852567 (+) | False | LOC113545588 |
| TU69928 | other | upstream | 946819 | 3728456 ~ 3730348 (+) | False | LOC113547237 |
| TU70239 | other | downstream | 8647 | 4707442 ~ 4708398 (+) | True | G59366 |
| TU70376 | other | downstream | 256340 | 4955135 ~ 4955462 (+) | False | LOC113547245 |
| TU70397 | other | downstream | 275400 | 4974195 ~ 5008133 (+) | True | G59492 |
| XR_004578077.1 | other | downstream | 480767 | 5179562 ~ 5188046 (+) | False | LOC113547261 |
| TU70896 | other | downstream | 881349 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
