Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70259 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G59385 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4559733 ~ 4560510 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70169 | lncRNA | downstream | 4824 | 4554700 ~ 4554909 (-) | True | G59303 |
| TU70151 | lncRNA | downstream | 71763 | 4486517 ~ 4487970 (-) | True | G59287 |
| TU70129 | lncRNA | downstream | 148701 | 4363084 ~ 4411032 (-) | True | LOC117597095 |
| XR_004578028.1 | lncRNA | downstream | 148912 | 4409520 ~ 4410821 (-) | False | LOC117597095 |
| TU70120 | lncRNA | downstream | 185095 | 4330091 ~ 4374638 (-) | True | G59264 |
| TU70264 | lncRNA | upstream | 2414 | 4562924 ~ 4563495 (-) | False | LOC117597059 |
| TU70266 | lncRNA | upstream | 20431 | 4580941 ~ 4596531 (-) | False | LOC117597175 |
| XR_004578076.1 | lncRNA | upstream | 29834 | 4590344 ~ 4591768 (-) | True | LOC113547239 |
| XR_004578075.1 | lncRNA | upstream | 32897 | 4593407 ~ 4596529 (-) | True | LOC117597175 |
| TU70281 | lncRNA | upstream | 116655 | 4677165 ~ 4678736 (-) | True | G59398 |
| XM_026947467.2 | mRNA | downstream | 32626 | 4514603 ~ 4527107 (-) | True | maf1b |
| XM_034303587.1 | mRNA | downstream | 275341 | 4269168 ~ 4284392 (-) | True | LOC117597053 |
| XM_034303795.1 | mRNA | downstream | 303455 | 4230485 ~ 4256278 (-) | True | LOC113537670 |
| XM_034303797.1 | mRNA | downstream | 349627 | 4171199 ~ 4210106 (-) | True | LOC113547240 |
| XM_034303809.1 | mRNA | downstream | 651654 | 3894592 ~ 3908079 (-) | True | LOC117597092 |
| XM_034303593.1 | mRNA | upstream | 278 | 4560788 ~ 4571827 (-) | True | LOC117597059 |
| XM_034304010.1 | mRNA | upstream | 44662 | 4605172 ~ 4609562 (-) | False | LOC113547216 |
| XM_034304009.1 | mRNA | upstream | 44662 | 4605172 ~ 4609562 (-) | True | LOC113547216 |
| XM_026947466.2 | mRNA | upstream | 52518 | 4613028 ~ 4633265 (-) | True | LOC113547217 |
| XM_026947531.2 | mRNA | upstream | 73815 | 4634325 ~ 4640284 (-) | True | LOC113547273 |
| TU70115 | other | downstream | 303449 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70112 | other | downstream | 324494 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU70066 | other | downstream | 639602 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
| XR_004578034.1 | other | downstream | 835168 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
| TU69907 | other | downstream | 926500 | 3630059 ~ 3633233 (-) | False | si:ch73-174h16.4 |
| TU70276 | other | upstream | 85946 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnar-ucg_1 | other | upstream | 249282 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70820 | other | upstream | 918032 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71182 | other | upstream | 1339739 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU71184 | other | upstream | 1339739 | 5900249 ~ 5959545 (-) | False | G60166 |
