Item | Value |
---|---|
RNA id | TU70276 |
length | 644 |
RNA type | TUCP |
GC content | 0.42 |
exon number | 2 |
gene id | LOC113547272 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 4642020 ~ 4647880 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU70266 | lncRNA | downstream | 49925 | 4580941 ~ 4596531 (-) | False | LOC117597175 |
XR_004578075.1 | lncRNA | downstream | 49927 | 4593407 ~ 4596529 (-) | True | LOC117597175 |
XR_004578076.1 | lncRNA | downstream | 54688 | 4590344 ~ 4591768 (-) | True | LOC113547239 |
TU70264 | lncRNA | downstream | 82961 | 4562924 ~ 4563495 (-) | False | LOC117597059 |
TU70259 | lncRNA | downstream | 85946 | 4559733 ~ 4560510 (-) | True | G59385 |
TU70281 | lncRNA | upstream | 29285 | 4677165 ~ 4678736 (-) | True | G59398 |
TU70283 | lncRNA | upstream | 29285 | 4677165 ~ 4678736 (-) | False | G59398 |
TU70282 | lncRNA | upstream | 29679 | 4677559 ~ 4678736 (-) | False | G59398 |
TU70306 | lncRNA | upstream | 109551 | 4757431 ~ 4757765 (-) | True | G59416 |
TU70478 | lncRNA | upstream | 222280 | 4870160 ~ 4914451 (-) | True | G59559 |
XM_026947531.2 | mRNA | downstream | 6172 | 4634325 ~ 4640284 (-) | True | LOC113547273 |
XM_026947466.2 | mRNA | downstream | 13191 | 4613028 ~ 4633265 (-) | True | LOC113547217 |
XM_034304010.1 | mRNA | downstream | 36894 | 4605172 ~ 4609562 (-) | False | LOC113547216 |
XM_034304009.1 | mRNA | downstream | 36894 | 4605172 ~ 4609562 (-) | True | LOC113547216 |
XM_034303593.1 | mRNA | downstream | 74629 | 4560788 ~ 4571827 (-) | True | LOC117597059 |
XM_026947528.2 | mRNA | upstream | 2814 | 4650694 ~ 4660380 (-) | False | LOC113547271 |
XM_026947527.2 | mRNA | upstream | 6665 | 4654545 ~ 4660380 (-) | True | LOC113547271 |
XM_026947532.2 | mRNA | upstream | 15260 | 4663140 ~ 4672185 (-) | True | LOC113547274 |
XM_034304061.1 | mRNA | upstream | 30859 | 4678739 ~ 4729122 (-) | False | ube3c |
XM_034304060.1 | mRNA | upstream | 30859 | 4678739 ~ 4729122 (-) | True | ube3c |
TU70115 | other | downstream | 390172 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
TU70112 | other | downstream | 411217 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
TU70066 | other | downstream | 726325 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
XR_004578034.1 | other | downstream | 921891 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
XR_004578021.1 | other | downstream | 1007248 | 3629988 ~ 3639208 (-) | True | si:ch73-174h16.4 |
trnar-ucg_1 | other | upstream | 161912 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
TU70820 | other | upstream | 830662 | 5478542 ~ 5485797 (-) | False | cldn1 |
TU71182 | other | upstream | 1252369 | 5900249 ~ 5930199 (-) | True | G60166 |
TU71184 | other | upstream | 1252369 | 5900249 ~ 5959545 (-) | False | G60166 |
trnak-cuu_3 | other | upstream | 1533007 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |