Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70306 |
| length | 335 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G59416 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4757431 ~ 4757765 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70281 | lncRNA | downstream | 78695 | 4677165 ~ 4678736 (-) | True | G59398 |
| TU70283 | lncRNA | downstream | 78695 | 4677165 ~ 4678736 (-) | False | G59398 |
| TU70282 | lncRNA | downstream | 78695 | 4677559 ~ 4678736 (-) | False | G59398 |
| TU70266 | lncRNA | downstream | 160900 | 4580941 ~ 4596531 (-) | False | LOC117597175 |
| XR_004578075.1 | lncRNA | downstream | 160902 | 4593407 ~ 4596529 (-) | True | LOC117597175 |
| TU70478 | lncRNA | upstream | 112395 | 4870160 ~ 4914451 (-) | True | G59559 |
| TU70504 | lncRNA | upstream | 170595 | 4928360 ~ 4940658 (-) | False | LOC117597188 |
| TU70512 | lncRNA | upstream | 182974 | 4940739 ~ 4942117 (-) | False | LOC117597188 |
| TU70520 | lncRNA | upstream | 199952 | 4957717 ~ 4957921 (-) | True | G59598 |
| TU70536 | lncRNA | upstream | 327318 | 5085083 ~ 5086357 (-) | False | LOC113547297 |
| XM_034304061.1 | mRNA | downstream | 28309 | 4678739 ~ 4729122 (-) | False | ube3c |
| XM_034304060.1 | mRNA | downstream | 28309 | 4678739 ~ 4729122 (-) | True | ube3c |
| XM_026947532.2 | mRNA | downstream | 85246 | 4663140 ~ 4672185 (-) | True | LOC113547274 |
| XM_026947528.2 | mRNA | downstream | 97051 | 4650694 ~ 4660380 (-) | False | LOC113547271 |
| XM_026947527.2 | mRNA | downstream | 97051 | 4654545 ~ 4660380 (-) | True | LOC113547271 |
| XM_026947582.2 | mRNA | upstream | 884 | 4758649 ~ 4769871 (-) | True | nom1 |
| XM_026947580.2 | mRNA | upstream | 108716 | 4866481 ~ 4878229 (-) | True | c8a |
| XM_034304066.1 | mRNA | upstream | 178120 | 4935885 ~ 4945021 (-) | True | LOC117597188 |
| XM_026947573.2 | mRNA | upstream | 203226 | 4960991 ~ 4973092 (-) | True | LOC113547302 |
| XM_034304063.1 | mRNA | upstream | 216497 | 4974262 ~ 4982521 (-) | False | LOC113547301 |
| TU70276 | other | downstream | 109551 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| TU70115 | other | downstream | 501147 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70112 | other | downstream | 522192 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU70066 | other | downstream | 837300 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
| XR_004578034.1 | other | downstream | 1032866 | 3710571 ~ 3724565 (-) | True | LOC117597100 |
| trnar-ucg_1 | other | upstream | 52027 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70820 | other | upstream | 720777 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71182 | other | upstream | 1142484 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU71184 | other | upstream | 1142484 | 5900249 ~ 5959545 (-) | False | G60166 |
| trnak-cuu_3 | other | upstream | 1423122 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
