Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70430 |
| length | 490 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G59521 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 5011920 ~ 5017802 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70379 | lncRNA | upstream | 53606 | 4958062 ~ 4958314 (+) | True | G59483 |
| TU70375 | lncRNA | upstream | 59322 | 4952371 ~ 4952598 (+) | True | G59479 |
| TU70374 | lncRNA | upstream | 61269 | 4950300 ~ 4950651 (+) | True | G59478 |
| TU70199 | lncRNA | upstream | 313125 | 4677167 ~ 4698795 (+) | False | G59329 |
| TU70198 | lncRNA | upstream | 331681 | 4677167 ~ 4680239 (+) | True | G59329 |
| XR_003404806.2 | lncRNA | downstream | 246214 | 5264016 ~ 5266014 (+) | True | LOC113547270 |
| TU70597 | lncRNA | downstream | 284080 | 5301882 ~ 5363888 (+) | True | G59663 |
| TU70598 | lncRNA | downstream | 284080 | 5301882 ~ 5369456 (+) | False | G59663 |
| TU70634 | lncRNA | downstream | 373109 | 5390911 ~ 5391425 (+) | False | LOC113547289 |
| TU70665 | lncRNA | downstream | 411479 | 5429281 ~ 5429622 (+) | True | G59725 |
| XM_034304068.1 | mRNA | upstream | 55453 | 4947137 ~ 4956467 (+) | True | LOC113547245 |
| XM_034303596.1 | mRNA | upstream | 77002 | 4922651 ~ 4934918 (+) | True | LOC117597060 |
| XM_026947564.2 | mRNA | upstream | 98298 | 4896968 ~ 4913622 (+) | True | LOC113547295 |
| XM_026947547.2 | mRNA | upstream | 117497 | 4879800 ~ 4894423 (+) | True | si:ch211-188c16.1 |
| XM_034303595.1 | mRNA | upstream | 145509 | 4805654 ~ 4866411 (+) | True | LOC113547214 |
| XM_034303597.1 | mRNA | downstream | 27326 | 5045128 ~ 5050075 (+) | True | LOC117597061 |
| XM_026947512.2 | mRNA | downstream | 134513 | 5152315 ~ 5159166 (+) | False | LOC113547260 |
| XM_026947510.2 | mRNA | downstream | 134515 | 5152317 ~ 5159166 (+) | True | LOC113547260 |
| XM_034304014.1 | mRNA | downstream | 134518 | 5152320 ~ 5178390 (+) | False | LOC113547260 |
| XM_026947514.2 | mRNA | downstream | 134518 | 5152320 ~ 5169408 (+) | False | LOC113547260 |
| TU70397 | other | upstream | 3787 | 4974195 ~ 5008133 (+) | True | G59492 |
| TU70376 | other | upstream | 56458 | 4955135 ~ 4955462 (+) | False | LOC113547245 |
| TU70239 | other | upstream | 303522 | 4707442 ~ 4708398 (+) | True | G59366 |
| XR_004578071.1 | other | upstream | 358799 | 4650477 ~ 4653121 (+) | True | LOC117597167 |
| XR_003404798.2 | other | upstream | 458882 | 4532921 ~ 4553038 (+) | True | shrprbck1r |
| XR_004578077.1 | other | downstream | 161760 | 5179562 ~ 5188046 (+) | False | LOC113547261 |
| TU70896 | other | downstream | 562342 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
| trnat-ugu_1 | other | downstream | 1121498 | 6139300 ~ 6139372 (+) | True | trnat-ugu_1 |
| trnat-ugu_2 | other | downstream | 1125763 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| trnar-ucu_1 | other | downstream | 1412684 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
