Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70973 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G59987 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 5724525 ~ 5724761 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70843 | lncRNA | downstream | 168749 | 5554951 ~ 5555776 (-) | True | G59865 |
| TU70847 | lncRNA | downstream | 232151 | 5492026 ~ 5492374 (-) | True | G59869 |
| TU70816 | lncRNA | downstream | 311700 | 5407481 ~ 5412825 (-) | True | G59843 |
| TU70812 | lncRNA | downstream | 333457 | 5389640 ~ 5391068 (-) | True | G59839 |
| TU70811 | lncRNA | downstream | 335227 | 5388430 ~ 5389298 (-) | True | G59838 |
| TU70978 | lncRNA | upstream | 1217 | 5725978 ~ 5726434 (-) | True | G59992 |
| TU71093 | lncRNA | upstream | 60534 | 5785295 ~ 5851346 (-) | True | G60092 |
| TU71143 | lncRNA | upstream | 113373 | 5838134 ~ 5840474 (-) | True | G60136 |
| TU71164 | lncRNA | upstream | 172618 | 5897379 ~ 5899015 (-) | True | G60151 |
| TU71166 | lncRNA | upstream | 173332 | 5898093 ~ 5899015 (-) | False | G60151 |
| XM_026947581.2 | mRNA | downstream | 30290 | 5617863 ~ 5694235 (-) | True | adcy1b |
| XM_026947456.2 | mRNA | downstream | 122258 | 5596290 ~ 5602267 (-) | True | igfbp1b |
| XM_026947457.2 | mRNA | downstream | 122270 | 5596290 ~ 5602255 (-) | False | igfbp1b |
| XM_034303602.1 | mRNA | downstream | 230486 | 5482363 ~ 5494039 (-) | True | cldn1 |
| XM_034303679.1 | mRNA | downstream | 281822 | 5435223 ~ 5442703 (-) | False | tada1 |
| XM_034304132.1 | mRNA | upstream | 1829 | 5726590 ~ 5738222 (-) | False | LOC113547299 |
| XM_026947569.2 | mRNA | upstream | 1829 | 5726590 ~ 5738222 (-) | True | LOC113547299 |
| XM_034304148.1 | mRNA | upstream | 179435 | 5904196 ~ 5917960 (-) | True | LOC113547287 |
| XM_034304149.1 | mRNA | upstream | 179572 | 5904333 ~ 5917960 (-) | False | LOC113547287 |
| XM_034303996.1 | mRNA | upstream | 206569 | 5931330 ~ 5949680 (-) | True | LOC113547251 |
| TU70820 | other | downstream | 238728 | 5478542 ~ 5485797 (-) | False | cldn1 |
| trnar-ucg_1 | other | downstream | 914661 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70276 | other | downstream | 1076645 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| TU70115 | other | downstream | 1468241 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70112 | other | downstream | 1489286 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU71182 | other | upstream | 175488 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU71184 | other | upstream | 175488 | 5900249 ~ 5959545 (-) | False | G60166 |
| trnak-cuu_3 | other | upstream | 456126 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| trnae-cuc_12 | other | upstream | 718983 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| TU71817 | other | upstream | 1157708 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
