Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU71021 |
| length | 200 |
| lncRNA type | intronic |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G60033 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 5853669 ~ 5853888 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71017 | lncRNA | upstream | 10595 | 5842775 ~ 5843074 (+) | True | G60029 |
| TU70979 | lncRNA | upstream | 126228 | 5726602 ~ 5727441 (+) | True | G59993 |
| TU70976 | lncRNA | upstream | 128001 | 5725446 ~ 5725668 (+) | True | G59990 |
| TU70891 | lncRNA | upstream | 296810 | 5556591 ~ 5556859 (+) | True | G59908 |
| TU70647 | lncRNA | upstream | 297971 | 5554950 ~ 5555698 (+) | True | G59707 |
| TU71024 | lncRNA | downstream | 44011 | 5897899 ~ 5898990 (+) | True | G60036 |
| TU71239 | lncRNA | downstream | 289644 | 6143532 ~ 6143802 (+) | True | trnat-ugu_2 |
| TU71260 | lncRNA | downstream | 354214 | 6208102 ~ 6208314 (+) | True | G60232 |
| XR_004577958.1 | lncRNA | downstream | 423717 | 6277605 ~ 6295446 (+) | True | LOC117596998 |
| TU71302 | lncRNA | downstream | 442103 | 6295991 ~ 6296234 (+) | True | G60267 |
| XM_026947540.2 | mRNA | upstream | 28740 | 5783658 ~ 5824929 (+) | True | LOC113547280 |
| XM_026947541.2 | mRNA | upstream | 28740 | 5783658 ~ 5824929 (+) | False | LOC113547280 |
| XM_026947556.2 | mRNA | upstream | 257444 | 5579796 ~ 5596225 (+) | True | LOC113547291 |
| XM_034304112.1 | mRNA | upstream | 299003 | 5506701 ~ 5554666 (+) | True | LOC113547279 |
| XM_026947568.2 | mRNA | upstream | 387550 | 5449482 ~ 5466119 (+) | True | angptl1b |
| XM_034303604.1 | mRNA | downstream | 65755 | 5919643 ~ 5928583 (+) | True | LOC117597064 |
| XM_026947473.2 | mRNA | downstream | 138040 | 5991928 ~ 6009784 (+) | True | dusp22b |
| XM_026947555.2 | mRNA | downstream | 161032 | 6014920 ~ 6037232 (+) | True | irf4a |
| XM_026947455.2 | mRNA | downstream | 308265 | 6162153 ~ 6163840 (+) | True | foxq1a |
| XM_026947454.2 | mRNA | downstream | 317141 | 6171029 ~ 6177159 (+) | True | foxf2a |
| TU70896 | other | upstream | 257543 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
| XR_004578077.1 | other | upstream | 665623 | 5179562 ~ 5188046 (+) | False | LOC113547261 |
| TU70397 | other | upstream | 845536 | 4974195 ~ 5008133 (+) | True | G59492 |
| TU70376 | other | upstream | 898207 | 4955135 ~ 4955462 (+) | False | LOC113547245 |
| TU70239 | other | upstream | 1145271 | 4707442 ~ 4708398 (+) | True | G59366 |
| trnat-ugu_1 | other | downstream | 285412 | 6139300 ~ 6139372 (+) | True | trnat-ugu_1 |
| trnat-ugu_2 | other | downstream | 289677 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| trnar-ucu_1 | other | downstream | 576598 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
| XR_004578001.1 | other | downstream | 741238 | 6595126 ~ 6596561 (+) | False | LOC117597080 |
| XR_003402765.2 | other | downstream | 2202168 | 8056056 ~ 8062839 (+) | False | LOC113526345 |
