Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU71790 |
| length | 259 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G60669 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 6878644 ~ 6881335 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71799 | lncRNA | downstream | 85692 | 6785327 ~ 6792952 (-) | True | G60672 |
| TU71581 | lncRNA | downstream | 236459 | 6641971 ~ 6642185 (-) | True | G60503 |
| XR_004578003.1 | lncRNA | downstream | 276418 | 6587543 ~ 6602226 (-) | False | LOC113547257 |
| XR_004578002.1 | lncRNA | downstream | 276418 | 6588011 ~ 6602226 (-) | True | LOC113547257 |
| TU71370 | lncRNA | downstream | 483573 | 6394865 ~ 6395071 (-) | True | G60333 |
| TU71867 | lncRNA | upstream | 349319 | 7230654 ~ 7230904 (-) | True | G60727 |
| TU71866 | lncRNA | upstream | 360790 | 7242125 ~ 7246436 (-) | True | G60726 |
| TU72009 | lncRNA | upstream | 559927 | 7441262 ~ 7538818 (-) | True | G60846 |
| TU72015 | lncRNA | upstream | 601786 | 7483121 ~ 7483703 (-) | True | G60852 |
| TU71992 | lncRNA | upstream | 614067 | 7495402 ~ 7500703 (-) | True | G60830 |
| XM_034303457.1 | mRNA | downstream | 10579 | 6837479 ~ 6868065 (-) | True | LOC117597000 |
| XM_034303459.1 | mRNA | downstream | 24430 | 6849774 ~ 6854214 (-) | True | LOC117597001 |
| XM_034303460.1 | mRNA | downstream | 24430 | 6850382 ~ 6854214 (-) | False | LOC117597001 |
| XM_034303456.1 | mRNA | downstream | 29803 | 6837479 ~ 6848841 (-) | False | LOC117597000 |
| XM_034303454.1 | mRNA | downstream | 29803 | 6837479 ~ 6848841 (-) | False | LOC117597000 |
| XM_034303461.1 | mRNA | upstream | 47 | 6881382 ~ 6883403 (-) | True | LOC117597002 |
| XM_034303444.1 | mRNA | upstream | 75437 | 6956772 ~ 6959079 (-) | True | LOC113526837 |
| XM_026914411.2 | mRNA | upstream | 107945 | 6989280 ~ 6995460 (-) | True | LOC113526956 |
| XM_026914102.2 | mRNA | upstream | 133693 | 7015028 ~ 7018277 (-) | True | exosc4 |
| XM_026914035.2 | mRNA | upstream | 140398 | 7021733 ~ 7042789 (-) | True | prkacbb |
| trnae-cuc_12 | other | downstream | 434829 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| trnak-cuu_3 | other | downstream | 697685 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| TU71184 | other | downstream | 919099 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU71182 | other | downstream | 948445 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU70820 | other | downstream | 1392847 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71817 | other | upstream | 1134 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| XR_004578041.1 | other | upstream | 1694171 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU72820 | other | upstream | 2101899 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 2433514 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72884 | other | upstream | 2456491 | 9337826 ~ 9338745 (-) | True | G61537 |
