Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU71937 |
| length | 366 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G60783 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 7485766 ~ 7486151 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71862 | lncRNA | upstream | 254841 | 7230651 ~ 7230925 (+) | True | G60722 |
| TU71670 | lncRNA | upstream | 388603 | 7092397 ~ 7097163 (+) | False | G60576 |
| TU71672 | lncRNA | upstream | 388603 | 7092397 ~ 7097163 (+) | True | G60576 |
| TU71678 | lncRNA | upstream | 452271 | 7016087 ~ 7033495 (+) | True | G60580 |
| XR_004577959.1 | lncRNA | upstream | 533961 | 6946325 ~ 6951805 (+) | True | LOC117596999 |
| TU71959 | lncRNA | downstream | 94684 | 7580835 ~ 7610190 (+) | True | G60801 |
| TU71963 | lncRNA | downstream | 107169 | 7593320 ~ 7617701 (+) | False | G60804 |
| TU71962 | lncRNA | downstream | 124872 | 7611023 ~ 7702098 (+) | True | G60804 |
| TU71966 | lncRNA | downstream | 132322 | 7618473 ~ 7667219 (+) | True | G60807 |
| TU72112 | lncRNA | downstream | 300063 | 7786214 ~ 7786635 (+) | True | G60931 |
| XM_026913509.2 | mRNA | upstream | 43512 | 7423560 ~ 7442254 (+) | True | LOC113526462 |
| XM_026914101.2 | mRNA | upstream | 80148 | 7396810 ~ 7405618 (+) | True | LOC113526768 |
| XM_026913759.2 | mRNA | upstream | 150849 | 7237070 ~ 7334917 (+) | True | LOC113526581 |
| XM_026947458.2 | mRNA | upstream | 717030 | 6759401 ~ 6768736 (+) | True | sharpin |
| XM_026947533.2 | mRNA | upstream | 729966 | 6740573 ~ 6755800 (+) | True | gpaa1 |
| XM_026913621.2 | mRNA | downstream | 57530 | 7543681 ~ 7675424 (+) | False | LOC113526517 |
| XM_026913622.2 | mRNA | downstream | 57530 | 7543681 ~ 7675424 (+) | False | LOC113526517 |
| XM_026913620.2 | mRNA | downstream | 57684 | 7543835 ~ 7653442 (+) | False | LOC113526517 |
| XM_026913617.2 | mRNA | downstream | 57685 | 7543836 ~ 7675424 (+) | True | LOC113526517 |
| XM_026913619.2 | mRNA | downstream | 57685 | 7543836 ~ 7675424 (+) | False | LOC113526517 |
| XR_004578001.1 | other | upstream | 889205 | 6595126 ~ 6596561 (+) | False | LOC117597080 |
| trnar-ucu_1 | other | upstream | 1055189 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
| trnat-ugu_2 | other | upstream | 1342129 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| trnat-ugu_1 | other | upstream | 1346394 | 6139300 ~ 6139372 (+) | True | trnat-ugu_1 |
| TU70896 | other | upstream | 1889640 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
| XR_003402765.2 | other | downstream | 569905 | 8056056 ~ 8062839 (+) | False | LOC113526345 |
| XR_004578049.1 | other | downstream | 1209201 | 8695352 ~ 8724440 (+) | True | LOC117597156 |
| TU72678 | other | downstream | 1408319 | 8894470 ~ 8896729 (+) | True | G61359 |
| XR_004578067.1 | other | downstream | 2272309 | 9758460 ~ 9774049 (+) | False | rbm14b |
| XR_003403991.2 | other | downstream | 2321170 | 9807321 ~ 9832280 (+) | False | gal3st3 |
