Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72309 |
| length | 821 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G61096 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 8109478 ~ 8110443 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72112 | lncRNA | upstream | 322843 | 7786214 ~ 7786635 (+) | True | G60931 |
| TU72113 | lncRNA | upstream | 322843 | 7786267 ~ 7786635 (+) | False | G60931 |
| TU71962 | lncRNA | upstream | 407380 | 7611023 ~ 7702098 (+) | True | G60804 |
| TU71966 | lncRNA | upstream | 442259 | 7618473 ~ 7667219 (+) | True | G60807 |
| TU71963 | lncRNA | upstream | 491777 | 7593320 ~ 7617701 (+) | False | G60804 |
| TU72311 | lncRNA | downstream | 7265 | 8117708 ~ 8118851 (+) | True | G61098 |
| TU72411 | lncRNA | downstream | 107651 | 8218094 ~ 8238482 (+) | True | G61162 |
| TU72427 | lncRNA | downstream | 181485 | 8291928 ~ 8326744 (+) | True | G61175 |
| TU72429 | lncRNA | downstream | 184928 | 8295371 ~ 8296101 (+) | True | G61176 |
| TU72653 | lncRNA | downstream | 614102 | 8724545 ~ 9037722 (+) | False | LOC113539869 |
| XM_026913382.2 | mRNA | upstream | 5461 | 8102405 ~ 8104017 (+) | True | znf830 |
| XM_026913275.2 | mRNA | upstream | 8413 | 8085146 ~ 8101065 (+) | False | LOC113526329 |
| XM_026913276.2 | mRNA | upstream | 8413 | 8085148 ~ 8101065 (+) | False | LOC113526329 |
| XM_034304139.1 | mRNA | upstream | 8413 | 8088077 ~ 8101065 (+) | True | LOC113526329 |
| XM_026913280.2 | mRNA | upstream | 8413 | 8088077 ~ 8101065 (+) | False | LOC113526329 |
| XM_026913781.2 | mRNA | downstream | 120737 | 8231180 ~ 8356530 (+) | True | LOC113526595 |
| XM_034303539.1 | mRNA | downstream | 354862 | 8465305 ~ 8504653 (+) | True | arhgef11 |
| XM_026914284.2 | mRNA | downstream | 398690 | 8509133 ~ 8524288 (+) | True | vangl2 |
| XM_034304095.1 | mRNA | downstream | 419745 | 8530188 ~ 8541291 (+) | True | si:cabz01074946.1 |
| XM_034304096.1 | mRNA | downstream | 419745 | 8530188 ~ 8541291 (+) | False | si:cabz01074946.1 |
| XR_003402765.2 | other | upstream | 46639 | 8056056 ~ 8062839 (+) | False | LOC113526345 |
| XR_004578001.1 | other | upstream | 1512917 | 6595126 ~ 6596561 (+) | False | LOC117597080 |
| trnar-ucu_1 | other | upstream | 1678901 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
| trnat-ugu_2 | other | upstream | 1965841 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| trnat-ugu_1 | other | upstream | 1970106 | 6139300 ~ 6139372 (+) | True | trnat-ugu_1 |
| XR_004578049.1 | other | downstream | 584909 | 8695352 ~ 8724440 (+) | True | LOC117597156 |
| TU72678 | other | downstream | 784027 | 8894470 ~ 8896729 (+) | True | G61359 |
| XR_004578067.1 | other | downstream | 1648017 | 9758460 ~ 9774049 (+) | False | rbm14b |
| XR_003403991.2 | other | downstream | 1696878 | 9807321 ~ 9832280 (+) | False | gal3st3 |
| XR_004578013.1 | other | downstream | 1750451 | 9860894 ~ 9881226 (+) | False | si:ch211-168d1.3 |
