Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72583 |
| length | 1106 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 4 |
| gene id | LOC113526753 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 8571496 ~ 8595625 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72549 | lncRNA | downstream | 36236 | 8452792 ~ 8551855 (-) | False | LOC113526822 |
| TU72568 | lncRNA | downstream | 37989 | 8479903 ~ 8550102 (-) | True | G61286 |
| TU72604 | lncRNA | downstream | 62591 | 8522890 ~ 8525500 (-) | False | G61310 |
| TU72606 | lncRNA | downstream | 62591 | 8522890 ~ 8525500 (-) | True | G61310 |
| TU72589 | lncRNA | downstream | 83497 | 8501656 ~ 8504594 (-) | True | G61301 |
| TU72768 | lncRNA | upstream | 80654 | 8672610 ~ 8679000 (-) | False | LOC113526752 |
| TU72775 | lncRNA | upstream | 136398 | 8728354 ~ 8738480 (-) | True | G61445 |
| TU72792 | lncRNA | upstream | 255628 | 8847584 ~ 8933417 (-) | False | LOC113526752 |
| TU72796 | lncRNA | upstream | 264347 | 8856303 ~ 8861746 (-) | False | LOC113526752 |
| TU72795 | lncRNA | upstream | 268310 | 8860266 ~ 8861746 (-) | False | LOC113526752 |
| XM_034303894.1 | mRNA | downstream | 9241 | 8572259 ~ 8578850 (-) | False | LOC113526753 |
| XM_034303898.1 | mRNA | downstream | 9241 | 8576612 ~ 8578850 (-) | False | LOC113526753 |
| XM_034303896.1 | mRNA | downstream | 12597 | 8571496 ~ 8575494 (-) | True | LOC113526753 |
| XM_026914282.2 | mRNA | downstream | 20103 | 8564114 ~ 8567988 (-) | True | LOC113526862 |
| XM_034303306.1 | mRNA | downstream | 27059 | 8544276 ~ 8561032 (-) | False | LOC117596993 |
| XM_034303873.1 | mRNA | upstream | 47512 | 8639468 ~ 9528825 (-) | True | LOC113526752 |
| XM_034303885.1 | mRNA | upstream | 325418 | 8917374 ~ 8924937 (-) | False | LOC113524717 |
| XM_034303886.1 | mRNA | upstream | 325418 | 8917374 ~ 8924937 (-) | True | LOC113524717 |
| XM_026936304.2 | mRNA | upstream | 722893 | 9314849 ~ 9327431 (-) | True | LOC113540087 |
| XM_026936305.2 | mRNA | upstream | 722893 | 9314849 ~ 9327324 (-) | False | LOC113540087 |
| XR_004578041.1 | other | downstream | 9241 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU71817 | other | downstream | 1688864 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| trnae-cuc_12 | other | downstream | 2144276 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| trnak-cuu_3 | other | downstream | 2407132 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| TU71184 | other | downstream | 2628546 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU72820 | other | upstream | 391278 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 722893 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72884 | other | upstream | 745870 | 9337826 ~ 9338745 (-) | True | G61537 |
| TU73323 | other | upstream | 934618 | 9526574 ~ 9528803 (-) | False | LOC113526752 |
| TU73432 | other | upstream | 1184322 | 9776278 ~ 9805318 (-) | True | G61972 |
