Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72678 |
| length | 555 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 5 |
| gene id | G61359 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 8894470 ~ 8896729 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578046.1 | lncRNA | upstream | 60445 | 8833213 ~ 8834025 (+) | True | LOC117597153 |
| TU72660 | lncRNA | upstream | 70292 | 8743763 ~ 8824178 (+) | True | G61350 |
| TU72656 | lncRNA | upstream | 80543 | 8812930 ~ 8813927 (+) | False | LOC113539869 |
| XR_004578048.1 | lncRNA | upstream | 88389 | 8804314 ~ 8806081 (+) | True | LOC117597155 |
| TU72650 | lncRNA | upstream | 94146 | 8797472 ~ 8800324 (+) | True | G61347 |
| TU72680 | lncRNA | downstream | 13931 | 8910660 ~ 8914984 (+) | False | LOC113524706 |
| TU72681 | lncRNA | downstream | 13931 | 8910660 ~ 8914984 (+) | False | LOC113524706 |
| TU72682 | lncRNA | downstream | 13931 | 8910660 ~ 8914984 (+) | False | LOC113524706 |
| XR_004578043.1 | lncRNA | downstream | 13948 | 8910677 ~ 8912015 (+) | False | LOC113524706 |
| XR_004578044.1 | lncRNA | downstream | 14058 | 8910787 ~ 8915841 (+) | True | LOC113524706 |
| XM_034303899.1 | mRNA | upstream | 57899 | 8834823 ~ 8836571 (+) | True | LOC117597150 |
| XM_034304095.1 | mRNA | upstream | 353179 | 8530188 ~ 8541291 (+) | True | si:cabz01074946.1 |
| XM_034304096.1 | mRNA | upstream | 353179 | 8530188 ~ 8541291 (+) | False | si:cabz01074946.1 |
| XM_026914284.2 | mRNA | upstream | 370182 | 8509133 ~ 8524288 (+) | True | vangl2 |
| XM_034303539.1 | mRNA | upstream | 389817 | 8465305 ~ 8504653 (+) | True | arhgef11 |
| XM_034303887.1 | mRNA | downstream | 91000 | 8987729 ~ 8991452 (+) | True | LOC117597148 |
| XM_034303888.1 | mRNA | downstream | 91000 | 8987729 ~ 8991452 (+) | False | LOC117597148 |
| XM_034303891.1 | mRNA | downstream | 91000 | 8987729 ~ 8991452 (+) | False | LOC117597148 |
| XM_034303890.1 | mRNA | downstream | 91000 | 8987729 ~ 8991452 (+) | False | LOC117597148 |
| XM_026936309.2 | mRNA | downstream | 432606 | 9329335 ~ 9332782 (+) | True | LOC113540089 |
| XR_004578049.1 | other | upstream | 170030 | 8695352 ~ 8724440 (+) | True | LOC117597156 |
| XR_003402765.2 | other | upstream | 831631 | 8056056 ~ 8062839 (+) | False | LOC113526345 |
| XR_004578001.1 | other | upstream | 2297909 | 6595126 ~ 6596561 (+) | False | LOC117597080 |
| trnar-ucu_1 | other | upstream | 2463893 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
| trnat-ugu_2 | other | upstream | 2750833 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| XR_004578067.1 | other | downstream | 861731 | 9758460 ~ 9774049 (+) | False | rbm14b |
| XR_003403991.2 | other | downstream | 910592 | 9807321 ~ 9832280 (+) | False | gal3st3 |
| XR_004578013.1 | other | downstream | 964165 | 9860894 ~ 9881226 (+) | False | si:ch211-168d1.3 |
| XR_004578014.1 | other | downstream | 964165 | 9860894 ~ 9881226 (+) | False | si:ch211-168d1.3 |
| trnas-gcu | other | downstream | 1015668 | 9912397 ~ 9912478 (+) | True | trnas-gcu |
