Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72775 |
| length | 226 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G61445 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 8728354 ~ 8738480 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72768 | lncRNA | downstream | 49354 | 8672610 ~ 8679000 (-) | False | LOC113526752 |
| TU72583 | lncRNA | downstream | 136398 | 8588091 ~ 8591956 (-) | False | LOC113526753 |
| TU72568 | lncRNA | downstream | 178252 | 8479903 ~ 8550102 (-) | True | G61286 |
| TU72792 | lncRNA | upstream | 109104 | 8847584 ~ 8933417 (-) | False | LOC113526752 |
| TU72796 | lncRNA | upstream | 117823 | 8856303 ~ 8861746 (-) | False | LOC113526752 |
| TU72795 | lncRNA | upstream | 121786 | 8860266 ~ 8861746 (-) | False | LOC113526752 |
| TU72800 | lncRNA | upstream | 140717 | 8879197 ~ 8880736 (-) | True | G61464 |
| XR_004578042.1 | lncRNA | upstream | 149677 | 8888157 ~ 8893055 (-) | True | LOC117597151 |
| XM_034303895.1 | mRNA | downstream | 132729 | 8572259 ~ 8595625 (-) | False | LOC113526753 |
| XM_034303894.1 | mRNA | downstream | 149504 | 8572259 ~ 8578850 (-) | False | LOC113526753 |
| XM_034303898.1 | mRNA | downstream | 149504 | 8576612 ~ 8578850 (-) | False | LOC113526753 |
| XM_034303896.1 | mRNA | downstream | 152860 | 8571496 ~ 8575494 (-) | True | LOC113526753 |
| XM_026914282.2 | mRNA | downstream | 160366 | 8564114 ~ 8567988 (-) | True | LOC113526862 |
| XM_034303885.1 | mRNA | upstream | 178894 | 8917374 ~ 8924937 (-) | False | LOC113524717 |
| XM_034303886.1 | mRNA | upstream | 178894 | 8917374 ~ 8924937 (-) | True | LOC113524717 |
| XM_026936304.2 | mRNA | upstream | 576369 | 9314849 ~ 9327431 (-) | True | LOC113540087 |
| XM_026936305.2 | mRNA | upstream | 576369 | 9314849 ~ 9327324 (-) | False | LOC113540087 |
| XM_026936307.2 | mRNA | upstream | 576369 | 9314849 ~ 9322601 (-) | False | LOC113540087 |
| XR_004578041.1 | other | downstream | 149504 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU71817 | other | downstream | 1829127 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| trnae-cuc_12 | other | downstream | 2284539 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| trnak-cuu_3 | other | downstream | 2547395 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| TU71184 | other | downstream | 2768809 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU72820 | other | upstream | 244754 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 576369 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72884 | other | upstream | 599346 | 9337826 ~ 9338745 (-) | True | G61537 |
| TU73323 | other | upstream | 788094 | 9526574 ~ 9528803 (-) | False | LOC113526752 |
| TU73432 | other | upstream | 1037798 | 9776278 ~ 9805318 (-) | True | G61972 |
