Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU73502 |
| length | 365 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC117596979 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 10026874 ~ 10037983 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578124.1 | lncRNA | downstream | 962 | 10026339 ~ 10026551 (-) | True | LOC117597218 |
| TU73477 | lncRNA | downstream | 31802 | 9994611 ~ 9995711 (-) | True | G62012 |
| TU73489 | lncRNA | downstream | 88408 | 9927333 ~ 9939105 (-) | True | G62023 |
| TU73421 | lncRNA | downstream | 275228 | 9750821 ~ 9752285 (-) | True | G61967 |
| TU73422 | lncRNA | downstream | 275228 | 9750821 ~ 9752285 (-) | False | G61967 |
| XR_004578128.1 | lncRNA | upstream | 4725 | 10037145 ~ 10037357 (-) | True | LOC117597222 |
| XR_003404094.1 | lncRNA | upstream | 6134 | 10038554 ~ 10038766 (-) | True | LOC113540720 |
| TU73334 | lncRNA | upstream | 6556 | 10038976 ~ 10041766 (-) | False | G61900 |
| TU73338 | lncRNA | upstream | 6556 | 10038976 ~ 10041766 (-) | False | G61900 |
| TU73340 | lncRNA | upstream | 6556 | 10038976 ~ 10041766 (-) | False | G61900 |
| XM_034303217.1 | mRNA | downstream | 3736 | 9997315 ~ 10023777 (-) | False | intu |
| XM_034303216.1 | mRNA | downstream | 3738 | 9997315 ~ 10023775 (-) | False | intu |
| XM_034303215.1 | mRNA | downstream | 6049 | 9997315 ~ 10021464 (-) | False | intu |
| XM_034303214.1 | mRNA | downstream | 6049 | 9997315 ~ 10021464 (-) | True | intu |
| XM_034303262.1 | mRNA | downstream | 34646 | 9980997 ~ 9992867 (-) | False | aadat |
| XM_034303271.1 | mRNA | upstream | 14152 | 10046572 ~ 10053214 (-) | False | trmt10b |
| XM_034303270.1 | mRNA | upstream | 14152 | 10046572 ~ 10053214 (-) | False | trmt10b |
| XM_026936792.2 | mRNA | upstream | 14152 | 10046572 ~ 10053214 (-) | True | trmt10b |
| XM_026936815.2 | mRNA | upstream | 38396 | 10070816 ~ 10073229 (-) | False | cxcl19 |
| XM_034303281.1 | mRNA | upstream | 46268 | 10078688 ~ 10080237 (-) | True | LOC113540372 |
| TU73432 | other | downstream | 222195 | 9776278 ~ 9805318 (-) | True | G61972 |
| TU73323 | other | downstream | 498710 | 9526574 ~ 9528803 (-) | False | LOC113526752 |
| TU72884 | other | downstream | 688768 | 9337826 ~ 9338745 (-) | True | G61537 |
| XR_003403995.2 | other | downstream | 700082 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72820 | other | downstream | 1043060 | 8983234 ~ 8984453 (-) | True | G61478 |
| trnan-guu | other | upstream | 441976 | 10474396 ~ 10474470 (-) | True | trnan-guu |
| trnan-guu_1 | other | upstream | 443203 | 10475623 ~ 10475696 (-) | True | trnan-guu_1 |
| trnan-guu_2 | other | upstream | 444438 | 10476858 ~ 10476930 (-) | True | trnan-guu_2 |
| trnan-guu_3 | other | upstream | 446879 | 10479299 ~ 10479372 (-) | True | trnan-guu_3 |
| trnan-guu_4 | other | upstream | 448097 | 10480517 ~ 10480591 (-) | True | trnan-guu_4 |
