Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU73657 |
| length | 292 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 1 |
| gene id | gba2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 10538245 ~ 10562006 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU73654 | lncRNA | downstream | 3876 | 10534073 ~ 10534422 (-) | True | G62167 |
| XR_004577943.1 | lncRNA | downstream | 39211 | 10497521 ~ 10499087 (-) | True | LOC117596989 |
| TU73609 | lncRNA | downstream | 54370 | 10474770 ~ 10483928 (-) | True | G62125 |
| TU73582 | lncRNA | downstream | 167735 | 10368321 ~ 10370563 (-) | True | G62109 |
| TU73581 | lncRNA | downstream | 173406 | 10364012 ~ 10364892 (-) | True | G62108 |
| TU73670 | lncRNA | upstream | 33566 | 10572155 ~ 10572360 (-) | True | G62183 |
| TU74041 | lncRNA | upstream | 388251 | 10926840 ~ 10953744 (-) | True | G62469 |
| TU74080 | lncRNA | upstream | 503756 | 11042345 ~ 11074703 (-) | True | G62504 |
| XR_004577933.1 | lncRNA | upstream | 541942 | 11080531 ~ 11083012 (-) | True | LOC117596980 |
| TU74367 | lncRNA | upstream | 733611 | 11272200 ~ 11360044 (-) | False | LOC113540328 |
| XM_026936810.2 | mRNA | downstream | 64157 | 10460219 ~ 10474141 (-) | False | c4h20orf27 |
| XM_034303277.1 | mRNA | downstream | 64300 | 10460219 ~ 10473998 (-) | False | c4h20orf27 |
| XM_026936807.2 | mRNA | downstream | 64628 | 10460219 ~ 10473670 (-) | False | c4h20orf27 |
| XM_026936808.2 | mRNA | downstream | 64649 | 10460219 ~ 10473649 (-) | True | c4h20orf27 |
| XM_026936809.2 | mRNA | downstream | 64783 | 10460219 ~ 10473515 (-) | False | c4h20orf27 |
| XM_034303280.1 | mRNA | upstream | 30963 | 10569552 ~ 10574841 (-) | False | msmp |
| XM_034303279.1 | mRNA | upstream | 30963 | 10569552 ~ 10573792 (-) | True | msmp |
| XM_026936780.2 | mRNA | upstream | 57104 | 10595693 ~ 10601685 (-) | False | si:dkeyp-75h12.7 |
| XM_034303263.1 | mRNA | upstream | 57104 | 10595693 ~ 10601629 (-) | True | si:dkeyp-75h12.7 |
| XM_034303222.1 | mRNA | upstream | 63248 | 10601837 ~ 10631020 (-) | False | tesk1 |
| trnan-guu_12 | other | downstream | 43060 | 10495165 ~ 10495238 (-) | True | trnan-guu_12 |
| trnan-guu_11 | other | downstream | 46635 | 10491590 ~ 10491663 (-) | True | trnan-guu_11 |
| trnan-guu_10 | other | downstream | 47877 | 10490348 ~ 10490421 (-) | True | trnan-guu_10 |
| trnan-guu_9 | other | downstream | 51557 | 10486668 ~ 10486741 (-) | True | trnan-guu_9 |
| trnan-guu_8 | other | downstream | 52786 | 10485439 ~ 10485512 (-) | True | trnan-guu_8 |
| XR_004577925.1 | other | upstream | 155540 | 10694129 ~ 10747646 (-) | False | poln |
| XR_004577926.1 | other | upstream | 167421 | 10706010 ~ 10747646 (-) | False | poln |
| XR_004577924.1 | other | upstream | 238171 | 10776760 ~ 10863498 (-) | False | svep1 |
| XR_004577923.1 | other | upstream | 242633 | 10781222 ~ 10863498 (-) | False | svep1 |
| TU73964 | other | upstream | 368538 | 10907127 ~ 10909999 (-) | False | nedd8 |
