Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74145 |
| length | 495 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G62554 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11215155 ~ 11215743 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74139 | lncRNA | upstream | 21304 | 11177029 ~ 11193851 (+) | True | G62549 |
| XR_004577937.1 | lncRNA | upstream | 31421 | 11182770 ~ 11183734 (+) | True | LOC117596983 |
| XR_004577928.1 | lncRNA | upstream | 192359 | 11020133 ~ 11022796 (+) | True | LOC113540371 |
| XR_004577929.1 | lncRNA | upstream | 192359 | 11020139 ~ 11022796 (+) | False | LOC113540371 |
| TU73963 | lncRNA | upstream | 305013 | 10907025 ~ 10910142 (+) | True | G62416 |
| TU74174 | lncRNA | downstream | 59696 | 11275439 ~ 11366783 (+) | True | G62572 |
| TU74196 | lncRNA | downstream | 104354 | 11320097 ~ 11360515 (+) | True | G62585 |
| TU74200 | lncRNA | downstream | 106727 | 11322470 ~ 11325192 (+) | False | LOC117596981 |
| XR_004577934.1 | lncRNA | downstream | 106733 | 11322476 ~ 11325752 (+) | True | LOC117596981 |
| XR_003404022.2 | lncRNA | downstream | 202264 | 11418007 ~ 11421178 (+) | True | LOC113540368 |
| XM_026936755.2 | mRNA | upstream | 23161 | 11183735 ~ 11191994 (+) | True | ajuba |
| XM_026936767.2 | mRNA | upstream | 43815 | 11159921 ~ 11171340 (+) | True | mmp14a |
| XM_026936763.2 | mRNA | upstream | 77729 | 11130175 ~ 11137426 (+) | True | LOC113540324 |
| XM_034303254.1 | mRNA | upstream | 104061 | 11090981 ~ 11111094 (+) | True | LOC113539896 |
| XM_034303253.1 | mRNA | upstream | 104061 | 11090981 ~ 11111094 (+) | False | LOC113539896 |
| XM_026936802.2 | mRNA | downstream | 24931 | 11240674 ~ 11244577 (+) | True | dhrs4 |
| XM_026936804.2 | mRNA | downstream | 40195 | 11255938 ~ 11258662 (+) | True | cideb |
| XM_026936747.2 | mRNA | downstream | 167691 | 11383434 ~ 11400606 (+) | True | si:dkey-183c6.8 |
| XM_034303244.1 | mRNA | downstream | 224345 | 11440088 ~ 11445185 (+) | True | LOC113539902 |
| XM_034303260.1 | mRNA | downstream | 238187 | 11453930 ~ 11462747 (+) | True | LOC117596977 |
| TU73719 | other | upstream | 551748 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 649431 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 683627 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| trnan-guu_13 | other | upstream | 684111 | 10530971 ~ 10531044 (+) | True | trnan-guu_13 |
| trnak-cuu_19 | other | upstream | 719685 | 10495398 ~ 10495470 (+) | True | trnak-cuu_19 |
| XR_003403980.2 | other | downstream | 429159 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU74787 | other | downstream | 1076771 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| TU75687 | other | downstream | 2202634 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 2255026 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 2342880 | 13558623 ~ 13562266 (+) | True | cited1 |
