Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74174 |
| length | 1043 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G62572 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11275439 ~ 11366783 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74145 | lncRNA | upstream | 59696 | 11215155 ~ 11215743 (+) | True | G62554 |
| TU74139 | lncRNA | upstream | 81588 | 11177029 ~ 11193851 (+) | True | G62549 |
| XR_004577937.1 | lncRNA | upstream | 91705 | 11182770 ~ 11183734 (+) | True | LOC117596983 |
| XR_004577928.1 | lncRNA | upstream | 252643 | 11020133 ~ 11022796 (+) | True | LOC113540371 |
| XR_004577929.1 | lncRNA | upstream | 252643 | 11020139 ~ 11022796 (+) | False | LOC113540371 |
| XR_003404022.2 | lncRNA | downstream | 51224 | 11418007 ~ 11421178 (+) | True | LOC113540368 |
| TU74234 | lncRNA | downstream | 70746 | 11437529 ~ 11437855 (+) | True | G62618 |
| XR_004577942.1 | lncRNA | downstream | 96300 | 11463083 ~ 11464606 (+) | True | LOC117596988 |
| TU74121 | lncRNA | downstream | 223943 | 11590726 ~ 11605230 (+) | False | LOC117596972 |
| TU74113 | lncRNA | downstream | 235665 | 11602448 ~ 11605230 (+) | False | LOC117596972 |
| XM_026936804.2 | mRNA | upstream | 16777 | 11255938 ~ 11258662 (+) | True | cideb |
| XM_026936802.2 | mRNA | upstream | 30862 | 11240674 ~ 11244577 (+) | True | dhrs4 |
| XM_026936755.2 | mRNA | upstream | 83445 | 11183735 ~ 11191994 (+) | True | ajuba |
| XM_026936767.2 | mRNA | upstream | 104099 | 11159921 ~ 11171340 (+) | True | mmp14a |
| XM_026936763.2 | mRNA | upstream | 138013 | 11130175 ~ 11137426 (+) | True | LOC113540324 |
| XM_026936747.2 | mRNA | downstream | 16651 | 11383434 ~ 11400606 (+) | True | si:dkey-183c6.8 |
| XM_034303244.1 | mRNA | downstream | 73305 | 11440088 ~ 11445185 (+) | True | LOC113539902 |
| XM_034303260.1 | mRNA | downstream | 87147 | 11453930 ~ 11462747 (+) | True | LOC117596977 |
| XM_034303231.1 | mRNA | downstream | 101167 | 11467950 ~ 11582422 (+) | False | LOC117596971 |
| XM_034303232.1 | mRNA | downstream | 182817 | 11549600 ~ 11582422 (+) | False | LOC117596971 |
| TU73719 | other | upstream | 612032 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 709715 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 743911 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| trnan-guu_13 | other | upstream | 744395 | 10530971 ~ 10531044 (+) | True | trnan-guu_13 |
| trnak-cuu_19 | other | upstream | 779969 | 10495398 ~ 10495470 (+) | True | trnak-cuu_19 |
| XR_003403980.2 | other | downstream | 278119 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU74787 | other | downstream | 925731 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| TU75687 | other | downstream | 2051594 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 2103986 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 2191840 | 13558623 ~ 13562266 (+) | True | cited1 |
