Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74456 |
| length | 1105 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G62813 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11557584 ~ 11607947 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74432 | lncRNA | downstream | 34283 | 11451438 ~ 11547288 (-) | True | G62791 |
| TU74373 | lncRNA | downstream | 110524 | 11441117 ~ 11471047 (-) | True | G62734 |
| XR_004577935.1 | lncRNA | downstream | 118533 | 11460070 ~ 11463038 (-) | False | LOC117596982 |
| XR_004577936.1 | lncRNA | downstream | 118533 | 11460070 ~ 11463038 (-) | True | LOC117596982 |
| TU74413 | lncRNA | downstream | 178550 | 11402269 ~ 11403021 (-) | False | si:dkey-183c6.7 |
| TU74482 | lncRNA | upstream | 1601 | 11609548 ~ 11609774 (-) | True | G62830 |
| TU74483 | lncRNA | upstream | 1974 | 11609921 ~ 11610121 (-) | True | G62831 |
| TU74484 | lncRNA | upstream | 3173 | 11611120 ~ 11611657 (-) | True | G62832 |
| TU74466 | lncRNA | upstream | 48683 | 11656630 ~ 11705457 (-) | False | G62817 |
| TU74465 | lncRNA | upstream | 55051 | 11662998 ~ 11705457 (-) | True | G62817 |
| XM_034303833.1 | mRNA | downstream | 46328 | 11524826 ~ 11535243 (-) | True | LOC117597110 |
| XM_034303241.1 | mRNA | downstream | 61920 | 11509731 ~ 11519651 (-) | False | LOC113540344 |
| XM_034303239.1 | mRNA | downstream | 62646 | 11509731 ~ 11518925 (-) | True | LOC113540344 |
| XM_034303240.1 | mRNA | downstream | 62917 | 11509731 ~ 11518654 (-) | False | LOC113540344 |
| XM_026936778.2 | mRNA | downstream | 149319 | 11426298 ~ 11432252 (-) | True | syt4 |
| XM_026937343.2 | mRNA | upstream | 14938 | 11622885 ~ 11626845 (-) | True | rab39bb |
| XM_034303303.1 | mRNA | upstream | 109398 | 11717345 ~ 11796600 (-) | False | si:dkey-172j4.3 |
| XM_034303300.1 | mRNA | upstream | 109398 | 11717345 ~ 11796600 (-) | True | si:dkey-172j4.3 |
| XM_034303301.1 | mRNA | upstream | 109398 | 11717345 ~ 11751713 (-) | False | si:dkey-172j4.3 |
| XM_034303299.1 | mRNA | upstream | 109398 | 11717345 ~ 11743538 (-) | False | si:dkey-172j4.3 |
| TU74378 | other | downstream | 46558 | 11533764 ~ 11535013 (-) | False | LOC117597110 |
| XR_003404120.1 | other | downstream | 367149 | 11214322 ~ 11214422 (-) | True | LOC113540752 |
| XR_003404119.1 | other | downstream | 368637 | 11212834 ~ 11212934 (-) | True | LOC113540751 |
| XR_003404121.1 | other | downstream | 372738 | 11208733 ~ 11208833 (-) | True | LOC113540753 |
| TU74341 | other | downstream | 399258 | 11177711 ~ 11182313 (-) | False | mrpl52 |
| TU74889 | other | upstream | 639327 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| TU74900 | other | upstream | 664271 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | upstream | 664425 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74901 | other | upstream | 664425 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
| XR_003404098.1 | other | upstream | 1596326 | 13204273 ~ 13204462 (-) | True | LOC113540725 |
