Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74587 |
| length | 1051 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G62932 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11862633 ~ 11863683 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74260 | lncRNA | upstream | 157371 | 11655467 ~ 11705262 (+) | False | si:ch211-200p22.4 |
| TU74270 | lncRNA | upstream | 186938 | 11675313 ~ 11675695 (+) | True | G62654 |
| TU74256 | lncRNA | upstream | 251576 | 11610836 ~ 11611057 (+) | True | G62640 |
| TU74255 | lncRNA | upstream | 253364 | 11608756 ~ 11609269 (+) | True | G62639 |
| TU74121 | lncRNA | upstream | 257403 | 11590726 ~ 11605230 (+) | False | LOC117596972 |
| TU74622 | lncRNA | downstream | 49167 | 11912850 ~ 11913106 (+) | True | G62967 |
| TU74638 | lncRNA | downstream | 71146 | 11934829 ~ 11937759 (+) | True | G62983 |
| TU74720 | lncRNA | downstream | 140307 | 12003990 ~ 12004223 (+) | True | G63061 |
| TU74814 | lncRNA | downstream | 384980 | 12248663 ~ 12249788 (+) | True | G63137 |
| TU74788 | lncRNA | downstream | 428831 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| XM_026936200.2 | mRNA | upstream | 38485 | 11818766 ~ 11824148 (+) | True | gpr185b |
| XM_026935954.2 | mRNA | upstream | 145894 | 11707459 ~ 11716739 (+) | True | zgc:92429 |
| XM_034304104.1 | mRNA | upstream | 157297 | 11644902 ~ 11705336 (+) | False | si:ch211-200p22.4 |
| XM_034304101.1 | mRNA | upstream | 157297 | 11644903 ~ 11705336 (+) | True | si:ch211-200p22.4 |
| XM_026935951.2 | mRNA | upstream | 157297 | 11644903 ~ 11705336 (+) | False | si:ch211-200p22.4 |
| XM_026935824.2 | mRNA | downstream | 222496 | 12086179 ~ 12093053 (+) | True | si:dkey-171c9.3 |
| XM_026936836.2 | mRNA | downstream | 236122 | 12099805 ~ 12122603 (+) | True | tnfsf10l |
| XM_034303321.1 | mRNA | downstream | 334659 | 12198342 ~ 12206875 (+) | True | tifa |
| XM_034303320.1 | mRNA | downstream | 335686 | 12199369 ~ 12206875 (+) | False | tifa |
| XM_026936972.2 | mRNA | downstream | 335768 | 12199451 ~ 12206875 (+) | False | tifa |
| XR_003403980.2 | other | upstream | 165338 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 1199226 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 1296909 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 1331105 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| trnan-guu_13 | other | upstream | 1331589 | 10530971 ~ 10531044 (+) | True | trnan-guu_13 |
| TU74787 | other | downstream | 428831 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| TU75687 | other | downstream | 1554694 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 1607086 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 1694940 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004577999.1 | other | downstream | 1841893 | 13705576 ~ 13719454 (+) | False | gc2 |
