Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU74788 |
| length | 1247 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 4 |
| gene id | si:dkey-112a7.4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 12292491 ~ 12295133 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74814 | lncRNA | upstream | 42726 | 12248663 ~ 12249788 (+) | True | G63137 |
| TU74720 | lncRNA | upstream | 288291 | 12003990 ~ 12004223 (+) | True | G63061 |
| TU74638 | lncRNA | upstream | 354755 | 11934829 ~ 11937759 (+) | True | G62983 |
| TU74622 | lncRNA | upstream | 379408 | 11912850 ~ 11913106 (+) | True | G62967 |
| TU74587 | lncRNA | upstream | 428831 | 11862633 ~ 11863683 (+) | True | G62932 |
| TU74948 | lncRNA | downstream | 60427 | 12355550 ~ 12357681 (+) | True | G63241 |
| TU74949 | lncRNA | downstream | 62709 | 12357832 ~ 12358248 (+) | True | G63242 |
| XR_003404040.2 | lncRNA | downstream | 473462 | 12768585 ~ 12772822 (+) | True | LOC113540557 |
| TU75255 | lncRNA | downstream | 475603 | 12770726 ~ 12772803 (+) | False | LOC113540557 |
| TU75285 | lncRNA | downstream | 506771 | 12801894 ~ 12834330 (+) | True | G63547 |
| XM_034303321.1 | mRNA | upstream | 85639 | 12198342 ~ 12206875 (+) | True | tifa |
| XM_034303320.1 | mRNA | upstream | 85639 | 12199369 ~ 12206875 (+) | False | tifa |
| XM_026936972.2 | mRNA | upstream | 85639 | 12199451 ~ 12206875 (+) | False | tifa |
| XM_026936836.2 | mRNA | upstream | 169911 | 12099805 ~ 12122603 (+) | True | tnfsf10l |
| XM_026935824.2 | mRNA | upstream | 199461 | 12086179 ~ 12093053 (+) | True | si:dkey-171c9.3 |
| XM_034304097.1 | mRNA | downstream | 213751 | 12508874 ~ 12670541 (+) | True | nlgn2a |
| XM_026936982.2 | mRNA | downstream | 213751 | 12508874 ~ 12667002 (+) | False | nlgn2a |
| XM_026936983.2 | mRNA | downstream | 213751 | 12508874 ~ 12667002 (+) | False | nlgn2a |
| XM_026937058.2 | mRNA | downstream | 417718 | 12712841 ~ 12716732 (+) | True | LOC113540507 |
| XM_026937059.2 | mRNA | downstream | 417719 | 12712842 ~ 12716732 (+) | False | LOC113540507 |
| XR_003403980.2 | other | upstream | 595219 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 1629107 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 1726790 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 1760986 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| trnan-guu_13 | other | upstream | 1761470 | 10530971 ~ 10531044 (+) | True | trnan-guu_13 |
| TU75687 | other | downstream | 1123254 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 1175646 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 1263500 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004577999.1 | other | downstream | 1410453 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_004578085.1 | other | downstream | 1960621 | 14255744 ~ 14269340 (+) | False | brms1 |
